KEGG   Arabidopsis lyrata (lyrate rockcress): 110229939
Entry
110229939         CDS       T01578                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110229939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    110229939
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110229939
 Complex B
    110229939
 Complex C
   U2 SnRNP specific factors
    110229939
SSDB
Motif
Pfam: ubiquitin Surp UN_NPL4 LptM_cons Ubiquitin_2
Other DBs
NCBI-GeneID: 110229939
NCBI-ProteinID: XP_020886814
LinkDB
Position
Unknown
AA seq 318 aa
MLTDLQEEGANQDNALAALPHLAHPPPIHLPDGLEFRRPKGMNGKEFKTMKLTAQFGAWY
GNDFWLGFKNRAGFEFTNPTHSNFPRFTRFVLEYSQVLKPPQDLKEKVSKNDTYLAAIHD
GFFRLLQSDFLQEMEWRLGGVVSMTDWHSSLDKDFPNDKEELPPPPPGTGTGMSSPLEPE
PNTQKIDEPAGLVPEEQFLAQHLGWCTIRVSVTDIDGCELLVIEKTVQSLSENVASFKEK
IAEEMGIPPERQVLYCKAGLLEENNKSLAHYNVGAGEILTLSLCACGRRGDMNKACRCME
MLAEALMLSLQKYDLQNN
NT seq 957 nt   +upstreamnt  +downstreamnt
atgcttactgatctacaagaagagggagctaatcaggataatgctcttgctgctctaccc
catcttgctcaccctccacccattcatctgccagatggtcttgagtttagacgtcccaag
gggatgaatggcaaggagtttaaaactatgaagctcacagcgcagtttggcgcttggtat
ggtaacgatttctggcttgggttcaagaacagagctgggtttgagtttacgaatccaact
catagcaacttcccacgtttcactcggtttgttctcgagtattcacaagtactaaaaccc
cctcaagatttgaaagaaaaggtgagcaagaatgacacctatttggcagccattcatgac
ggtttcttccgtcttcttcagtctgattttctccaagagatggaatggcggcttggaggg
gtggtgtctatgactgattggcattcttctctcgacaaagattttcctaacgacaaggaa
gagctgccaccaccaccaccaggaactggaactggaatgtcttctcctctggaaccagag
ccaaatacacaaaagattgacgagcctgcaggccttgttccagaagagcagtttcttgct
caacacctgggttggtgtaccatcagggtttctgttaccgatatcgatggttgtgagcta
ctggtcattgagaaaacagtgcagtcgttatcggaaaacgtggcgagtttcaaggagaaa
atagctgaggagatgggaatcccaccagagagacaggtattatactgtaaagccgggttg
ttagaggagaacaacaagtcacttgcacattacaatgtgggagcaggagagatcctaact
ctgtccttgtgtgcgtgtgggagacggggagatatgaacaaggcttgtcgatgcatggaa
atgctcgctgaggcgttaatgttgtccttgcagaagtatgatctccaaaataattag

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