KEGG   Arabidopsis lyrata (lyrate rockcress): 110230301
Entry
110230301         CDS       T01578                                 
Name
(RefSeq) DNA repair protein recA homolog 3, mitochondrial isoform X1
  KO
K03553  recombination protein RecA
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110230301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    110230301
DNA repair and recombination proteins [BR:aly03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     110230301
    RecFOR pathway proteins
     110230301
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    110230301
SSDB
Motif
Pfam: RecA ATPase RecA_C Rad51 ATPase_2 AAA_24 AAA_25 ABC_tran AAA_35 AAA_16 nSTAND3 AAA_22 AAA_23 AAA_14 AAA_30 AAA CLP1_P TK
Other DBs
NCBI-GeneID: 110230301
NCBI-ProteinID: XP_020888477
LinkDB
Position
Unknown
AA seq 432 aa
MARILRNVSSLRSSLFSSEVLRRSVVGPSFQLRGFAAKAKKKSKSDDGSSEEGMSKKEIA
LQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGPE
ASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSL
VDTLIRSGSVDVIVVDSVSKVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS
QTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQV
SVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKE
ALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDESPAL
VVGATAVVVEAA
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcgaggattctccgaaacgtttcttcactgagaagctctctgttctcgtcagaggta
cttagaagaagtgtggttggaccatcgtttcagctccgaggctttgctgccaaagctaaa
aagaaatctaagtcagatgatggatcatctgaagaaggtatgtcgaaaaaggagattgct
cttcagcaagcacttgatcagattaccagttcatttggcaaagggtccataatgtatctc
ggtcgtgctgtttctcctagaaatgtcccggttttctctaccggatcttttgcccttgat
gtagctttgggagttggtggccttcctaaggggcgtgttgtggagatatatggtcctgaa
gcatcgggaaagacaacacttgctcttcatgttattgcagaagcacaaaaacaaggagga
acctgtgtctttgtagatgctgagcatgctcttgattcgtcacttgctaaggcaatcggt
gtaaatacagaaaatcttcttctatcgcagcctgattgtggcgaacaggctcttagtctt
gtggacactttaatccgaagtggttcagttgatgttattgtagttgacagtgtaagtaag
gtggctgctcttgtacctaaaggagaactcgagggagagatgggtgatgcccatatggct
atgcaagccagattgatgagccaagctttgcgtaaattgagccattctttatcgttatcg
caaacacttctgatctttataaatcaggtgagatcaaaactatctacgtttggaggattt
ggaggtccaacagaagttacatgtggtggaaatgctttgaagttttatgcttctatgcgt
ttgaatattaagcgaattggacttatcaagaaaggcgaagagacaacgggaagtcaagtc
tccgtgaagatagtgaagaacaaactcgctccgccatttagaactgctcagtttgagctt
gaattcggcaaaggaatctgcaagatcacggagataatcgacctgagcataaagcacaag
ttcattgcgaaaaacggaacattctacaatctcaacggtaaaaactaccatggaaaagag
gctttaaagagattcctaaaacagaacgaatctgatcaagaagagctcatgaagaagctc
caagacaagctcatcgccgatgaagctgcagataaggaaactgaatctgaatctgaggaa
gaagattctctgagagttgtggtttcacctgacaacacagatgatgaatcaccagctctt
gttgttggtgctactgcagtggttgttgaagcagcatga

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