Arabidopsis lyrata (lyrate rockcress): 110230301
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Entry
110230301 CDS
T01578
Name
(RefSeq) DNA repair protein recA homolog 3, mitochondrial isoform X1
KO
K03553
recombination protein RecA
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110230301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
110230301
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
110230301
RecFOR pathway proteins
110230301
TLS (translesion DNA synthesis) factors
Other SOS response factors
110230301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecA
ATPase
RecA_C
Rad51
ATPase_2
AAA_24
AAA_25
ABC_tran
AAA_35
AAA_16
nSTAND3
AAA_22
AAA_23
AAA_14
AAA_30
AAA
CLP1_P
TK
Motif
Other DBs
NCBI-GeneID:
110230301
NCBI-ProteinID:
XP_020888477
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MARILRNVSSLRSSLFSSEVLRRSVVGPSFQLRGFAAKAKKKSKSDDGSSEEGMSKKEIA
LQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGPE
ASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSL
VDTLIRSGSVDVIVVDSVSKVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS
QTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQV
SVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKE
ALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDESPAL
VVGATAVVVEAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggattctccgaaacgtttcttcactgagaagctctctgttctcgtcagaggta
cttagaagaagtgtggttggaccatcgtttcagctccgaggctttgctgccaaagctaaa
aagaaatctaagtcagatgatggatcatctgaagaaggtatgtcgaaaaaggagattgct
cttcagcaagcacttgatcagattaccagttcatttggcaaagggtccataatgtatctc
ggtcgtgctgtttctcctagaaatgtcccggttttctctaccggatcttttgcccttgat
gtagctttgggagttggtggccttcctaaggggcgtgttgtggagatatatggtcctgaa
gcatcgggaaagacaacacttgctcttcatgttattgcagaagcacaaaaacaaggagga
acctgtgtctttgtagatgctgagcatgctcttgattcgtcacttgctaaggcaatcggt
gtaaatacagaaaatcttcttctatcgcagcctgattgtggcgaacaggctcttagtctt
gtggacactttaatccgaagtggttcagttgatgttattgtagttgacagtgtaagtaag
gtggctgctcttgtacctaaaggagaactcgagggagagatgggtgatgcccatatggct
atgcaagccagattgatgagccaagctttgcgtaaattgagccattctttatcgttatcg
caaacacttctgatctttataaatcaggtgagatcaaaactatctacgtttggaggattt
ggaggtccaacagaagttacatgtggtggaaatgctttgaagttttatgcttctatgcgt
ttgaatattaagcgaattggacttatcaagaaaggcgaagagacaacgggaagtcaagtc
tccgtgaagatagtgaagaacaaactcgctccgccatttagaactgctcagtttgagctt
gaattcggcaaaggaatctgcaagatcacggagataatcgacctgagcataaagcacaag
ttcattgcgaaaaacggaacattctacaatctcaacggtaaaaactaccatggaaaagag
gctttaaagagattcctaaaacagaacgaatctgatcaagaagagctcatgaagaagctc
caagacaagctcatcgccgatgaagctgcagataaggaaactgaatctgaatctgaggaa
gaagattctctgagagttgtggtttcacctgacaacacagatgatgaatcaccagctctt
gttgttggtgctactgcagtggttgttgaagcagcatga
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