Arabidopsis lyrata (lyrate rockcress): 110230691
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Entry
110230691 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110230691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
110230691
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110230691
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110230691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
SmpB
PPP4R2
Motif
Other DBs
NCBI-GeneID:
110230691
NCBI-ProteinID:
XP_020889890
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MAGEASTSRRKRQRVPSIGENGGGDAVARSGTLFELDLLDCPVCCHALTIPIFQCDNGHI
ACSSCCTKLRNKCPSCTLPIGNYRSRIMERVVEAVIVPCPNAKHGCTEKFSYGKELVHEK
ECRFALCYCPAPNCNYSGVCKDLYRHYYANHRDTWNEFGCGNSTGAWLRISDKILVLQEY
RDGPLVAVQCFKEREGVYVIANCIAPSAAGVGEFSYELSYRTPMGGRDTMTYKSGEMNRI
QKVSFQIPEKGFMLVPHYFLGDWSTLKMEICICKLKKEEQQDEADEDEDDEEEEDDDDDE
EDDDDEEE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagcctcgactagccgccgaaagaggcaacgagttccctctattggcgaa
aatggtggaggagatgcggtggcgcgatctgggacgttgttcgagctagatcttctcgat
tgtccagtttgttgtcacgctctcacgattcctatctttcagtgtgacaatggacatata
gcttgttcttcttgctgtactaaactgaggaacaaatgcccttcctgcactttgcccatt
ggtaactatagatctagaataatggagagagttgtggaagcagtcattgtcccatgccca
aacgccaaacacggctgcacagagaagttctcttatggcaaagagttggtccatgagaag
gaatgcagatttgctctgtgctattgtcctgcaccaaactgcaactactcgggtgtgtgc
aaggatctctataggcactactacgctaaccacagggacacatggaatgaatttgggtgt
ggaaattccactggtgcatggctgcgtatcagtgataagattttagtccttcaggaatat
agggatggtccattagttgcagttcagtgtttcaaggagcgagaaggagtgtatgtgatt
gcgaattgtatagcaccttctgcagcaggagttggggagttctcctatgagctctcatac
aggacgccgatgggaggtagggacactatgacgtataaatcgggggagatgaataggatt
cagaaagtgagttttcaaattccggagaagggcttcatgttagttcctcattatttcttg
ggtgattggtctacgttaaagatggaaatttgcatatgcaagctaaaaaaagaagaacaa
caagacgaagctgatgaagatgaagatgatgaagaagaagaagatgatgatgatgatgaa
gaagatgatgatgatgaagaagagtaa
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