Arabidopsis lyrata (lyrate rockcress): 110230971
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Entry
110230971 CDS
T01578
Name
(RefSeq) homeobox-leucine zipper protein HDG11
KO
K09338
homeobox-leucine zipper protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
110230971
Transcription factors [BR:
aly03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
110230971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110230971
NCBI-ProteinID:
XP_020890987
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MSFVVGVGGSGSGSGGDGGGSQHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEK
QRNQLSRELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREALKHA
ICPNCGGPPVSEDPYFDEQKLRIENAHLREELERMSTIASKYMGRPISQLSTLHPMHISP
LDLSMTSLTGCGPCGHGPSLDFDLLPGSSMAVGPNNLQSQPNLAISDMDKPIMTDIALTA
MEELLRLLHSNEPLWTRTDDCRDILNIGSYENVFPRSSNRGKNHNFRVEASRSSGIVFMN
AMALVDMFMDSVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATR
EFCELRYCQQIEQGSWIVVNVSYDLPQFVSHSQSYRFPSGCLIQDMPNGYSKVTWVEHIE
TEEKEPIHELYREIIHRGIAFGAERWVTTLQRMCERFASLSVPASSSRDLGGVIPSPEGK
RSMMRLAQRMISNYCLSVSRSNNTRSTVVSELNEVGIRVTAHKSPEPNGTILCAATTFWL
PNSPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGSNATHSNNML
ILQESSTDSSGALVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSTSEQGGGA
STSSGRSSSSGSLITVGFQIMVSNLPSAKLNMESVETVNNLIGTTVHQIKTALSGPTAST
TA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtcgtcggcgtcggcgggagtggtagtggaagcggcggagacggtggtggt
agtcaacatcacgacggctctgaaactgataggaagaagaaacgttaccatcgtcacacc
gctcaacagattcaacgcctagaatcgagtttcaaggagtgtcctcatccagatgagaaa
cagaggaatcaacttagcagagaattgggtttggctccaagacaaatcaagttctggttt
cagaacagaagaactcagcttaaggcgcaacatgagagagctgataatagtgcactaaag
gcagagaatgataagattcgttgtgaaaacattgccattagagaagctctcaagcatgct
atatgtcctaactgtggaggtcctcctgttagtgaagatccttactttgatgaacaaaag
cttcgaattgaaaatgcacatcttagagaagagcttgaaagaatgtcgaccattgcatca
aagtacatgggaaggccgatatcgcaactctctacgctacatccaatgcacatctcaccg
ttggatttgtcaatgactagtttaactggttgtggaccttgtggtcatggtccttcactg
gattttgatcttcttccaggaagttctatggctgttggtcctaataatctgcaatctcag
cctaacttggctatatcagacatggacaagcctattatgaccgatattgctttgactgca
atggaagaattgctcaggcttcttcactcaaacgaacccctctggacaagaacagatgac
tgcagagacattctcaatattggtagctatgagaatgttttcccaagatcaagtaaccga
gggaagaaccataactttcgagtagaggcatcaaggtcttctggtattgttttcatgaat
gctatggcacttgtcgacatgttcatggatagtgtcaagtggacagaactctttccctcg
atcattgcagcttctaaaacacttgcagtgatttcttcaggaatgggaggtacccatgag
ggtgcattgcatttgttgtatgaagaaatggaagtgctttcgcctttagtagcaacacgc
gaattctgtgagctacgttattgtcagcagattgaacaaggaagctggatagttgtaaat
gtttcatatgatcttcctcagtttgtttctcactctcagtcctatagatttccatctgga
tgcttgattcaggacatgcccaatggatattccaaggttacttgggttgaacatattgaa
actgaagaaaaagaacctattcatgagctatacagagagattattcacagagggattgct
tttggagctgaacgatgggtaaccactctccagagaatgtgtgaaagattcgcgtctcta
tcggtaccagcgtcttcatcccgtgatctcggtggagtgattccatcgccggaagggaag
agaagcatgatgagacttgctcagagaatgattagcaactactgtttaagtgtcagcaga
tccaacaacacgcgctcaaccgttgtttcggaacttaacgaagttggaatccgtgtgact
gcacataagagccctgaaccaaacggtacaatcctctgtgcagccaccaccttctggctt
cccaattctcctcaaaatgtcttcaatttcctcaaagatgaaagaactcgtcctcagtgg
gatgttctttcaaacggaaacgcggtgcaagaagttgctcacatctcaaacggatcacat
cccggaaactgtatatcggttctacgtggatccaatgcaacacatagcaacaacatgcta
attctgcaagaaagctcaacagactcatcaggagctcttgtggtgtacagtccagtggat
ttagcagcgttgaacatcgcaatgagcggtgaagatccttcttacattcccctcttgtcc
tcaggtttcacaatctcaccagatggaaacggctcaacctctgaacaaggaggtggagcc
tcaacgagctcaggacggtcatcatcaagcggttcgttgattacggttgggtttcagata
atggttagcaatttaccgtcggcaaaactgaatatggagtcggtggaaacggttaataac
ctgataggaaccactgtacaccaaattaaaaccgccttgagcggtcctacagcttcaact
acagcttga
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integrated database retrieval system
