Arabidopsis lyrata (lyrate rockcress): 110231031
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Entry
110231031 CDS
T01578
Name
(RefSeq) ABC transporter E family member 1-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
110231031
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
110231031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
Fer4
Fer4_6
Fer4_21
Fer4_2
Fer4_9
Fer4_10
SMC_N
Fer4_4
Fer4_17
Fer4_3
Fer4_7
AAA_21
Motif
Other DBs
NCBI-GeneID:
110231031
NCBI-ProteinID:
XP_020891356
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MADRLTRIAIVSEDRCKPKKCRQECKKSCPVVKTGKLCIEVAPTSKTAFLSEELCIGCGI
CVKKCPFEGIQIINLPKDLAKDTTHRYGANGFKLHRLPVPRPGQVLGVRGTNGNGKTTGL
KIWPAGDLKPIFGRFNTPPDWEEILTHFRGSELQSYFIRVVEENLKTAIKPQHVDHIKEF
VQDNLGKKLEEMDERGMMEEICADMELNQVLEREARQVSGGELQRFAIAAVFVKKADIYM
FDEPSSYLDVRQRLKAAQVIRSLLRHDSYVIVVEHDLSVLDYLSDFVCCLYGKPGAYGVV
TLPFSVREGINVFLAGFIPTENLRFRDESLTFRVSETTQESDGEVKSYARYKYPYNE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgattgacgcgaatcgctatcgtgagtgaagaccggtgcaagcctaagaaa
tgtcgccaggagtgcaagaagagctgtcctgttgtcaagactgggaaactttgtatcgag
gttgctcctacttccaagactgctttcttatcagaggagctttgtattggatgtggtatc
tgtgttaagaaatgcccctttgaaggtattcagattatcaatcttcctaaggacttagcc
aaagatacaacccatcgatatggggctaatggatttaaactgcacaggcttccggttcca
cggccggggcaagttcttggcgtgcgtggaaccaatggtaatggcaaaactactggtctc
aaaatctggcctgctggagacctcaagccaattttcggcagatttaatactcctcctgac
tgggaagaaattttgactcacttccgcgggtcagaacttcaaagctacttcatccgagtc
gtagaagagaatctaaagactgctataaagccacaacatgttgaccacataaaagaattt
gttcaagataatcttgggaagaagcttgaggagatggacgagagaggaatgatggaagag
atttgtgctgatatggagttgaaccaggtcttggagcgtgaagcaagacaagtatctggt
ggagagctgcagaggtttgcgattgccgcagttttcgtaaagaaagctgatatatacatg
tttgatgaaccatctagctacctcgatgtgaggcagagactcaaagctgctcaagttata
cgctcactcctcaggcatgacagctacgtaattgttgtggagcacgacctcagcgtcctt
gactatctctcggatttcgtgtgctgtttgtatgggaaaccaggagcatatggtgtcgtg
actctccccttttctgtcagagaaggaatcaatgtgttcttggccgggtttatccccaca
gaaaacttgcgtttcagggatgaatctctgaccttcagggtttctgagactacacaagag
agtgatggggaagtgaagtcctatgcaagatacaaatacccatacaatgagtaa
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