Arabidopsis lyrata (lyrate rockcress): 110231139
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Entry
110231139 CDS
T01578
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic
KO
K03553
recombination protein RecA
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110231139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
110231139
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
110231139
RecFOR pathway proteins
110231139
TLS (translesion DNA synthesis) factors
Other SOS response factors
110231139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecA_N
RecA_C
ATPase
Rad51
AAA_25
MT3502_N
ATPase_2
DUF7125
AAA_24
AAA_16
BMC
PAXNEB
Motif
Other DBs
NCBI-GeneID:
110231139
NCBI-ProteinID:
XP_020891757
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MDSHLVLSLKLNPCFTPLSPLFSFTPCSYSPPLWLSSCYSRLLHSPVTVTAAKKLSHNIS
SEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGI
LTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSK
ALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMG
LQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEI
RSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAEIMEV
VVKKGSWYSYEDQRLGQGREKALQHFRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSS
SSASHREEEEEDSLDDFQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggattcacacctagtcttgtctctgaagctaaatccttgcttcactcctctttctcct
ctcttctctttcactccatgttcttattcgccgccgttatggctttcttcttgctactcc
cgcctcctccattctcctgtcaccgtcaccgccgcgaagaaactctcccacaacatcagt
tctgaattcgatgacagaatcaacggcgctctctctcccgacgctgattcccgcttcctc
gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga
agtgttacaagattggggagtgctggtggagcactagtggagactttttcgagtggtatt
ttgactcttgatcttgctttaggtggaggcctgccaaagggtcgggtagtcgaaatatat
ggaccagaaagtagtgggaagaccacgctagcactccatgctattgctgaagtgcagaag
cttggaggcaatgcaatgcttgttgatgcagagcatgcctttgatccagcgtattctaaa
gcattaggtgttgatgtagaaaatttgatagtgtgccagccagataatggcgagatggct
ttagaaactgcagaccgtatgtgtcgctcaggtgcggttgaccttatatgtgttgattct
gtttcagcacttactccacgagctgagattgaaggtgagattggaatgcagcaaatgggt
ttgcaagctcgtcttatgagtcaagctcttcgtaaaatgtcaggaaacgcctctaaagct
ggttgtacacttattttcctgaaccaaataagatacaagattggtgtgtactatggaaat
ccagaggtgaccagcggaggaattgcgttgaagttcttcgcgtcagtccggctagaaatt
cgttctgctgggaagatcaaatctagcaaaggggatgaagatataggtcttcgagctcgt
gtaagagtgcagaagagcaaggtttcaagaccatataagcaagcagagttcgagattatg
ttcggggaaggagttagtaaactgggatgcattcttgattgtgctgaaattatggaggtt
gtggttaagaagggttcttggtacagctacgaagaccaaaggctcgggcaaggaagagag
aaagcactgcagcactttagggaaaaccctgctcttcaagacgaaattgagaagaaagtg
agattgttgatgttagatggagaagttcatcgatcaactcctttgatgagcagcagctct
tcctcagcttcgcatcgtgaagaagaagaagaggactcgcttgacgatttccaatga
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