Arabidopsis lyrata (lyrate rockcress): 9298343
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Entry
9298343 CDS
T01578
Name
(RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00750
Vitamin B6 metabolism
aly01100
Metabolic pathways
aly01240
Biosynthesis of cofactors
Module
aly_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
9298343
Enzymes [BR:
aly01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
9298343
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
His_biosynth
ThiI
FMN_dh
DHO_dh
IGPS
NanE
Motif
Other DBs
NCBI-GeneID:
9298343
NCBI-ProteinID:
XP_020876099
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MADQAMTDQEQGAVTLYSGAAITDAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKIAES
AGACSVIVSDPVRSRGGVRRMPDPVLIKEVKRAVSVPVMGRARVGHFVEAQILESLAVDY
IDESEIISVADEDHFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAE
TVKNVRSLMGEVRVLNNMDDDEVFTFAKKISAPYDLVAQTKQMGRVPVVQFASGGITTPA
DAALMMQLGCDGVFVGSEVFDGPDPFKKLRSIVQAVQHYNDPHVLAEMSSGLENAMESLN
VRGDRIQDFSQGSV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagctatgactgatcaagaacaaggagctgttactctctacagcggcgca
gccatcaccgacgcgaagaaaaaccatccgttctctgttaaggttggattagctcaagta
cttcgtggcggcgccattgttgaggtttcttctgttaaccaggctaagatcgctgaatcc
gcaggcgcatgttctgttatcgtctcagatccggttcgatctcgcggtggtgttcgtcgt
atgccggatccggttcttatcaaagaggtgaaacgagctgtgtctgtacctgtgatggga
cgagctcgcgttggtcatttcgttgaggctcagatcttggaatctcttgcggttgattac
attgacgagagcgagattatctctgtagcggacgaagatcatttcatcaacaaacacaat
ttccgatctccgttcatttgtggttgccgtgatacaggagaagctttgaggagaatcaga
gaaggtgctgctatgatcaggatccaaggagatttaaccgcaacaggtaatattgcagag
actgtgaagaacgttaggtcattgatgggtgaagttagagtcttgaacaacatggatgat
gatgaggtgtttacatttgctaagaagatatcagcaccgtatgatcttgtggctcagact
aagcagatgggtagggttccggtggttcagttcgcatcaggtgggatcacgactcctgct
gatgcagctttgatgatgcagcttggttgtgatggagttttcgttggttctgaggttttt
gatggtcctgatccgtttaagaagcttaggagcattgttcaagctgttcaacattacaat
gatcctcatgtgttggctgagatgagttctgggttggagaatgcaatggagagcttaaat
gttcgtggtgacaggattcaggattttagccaaggaagtgtttga
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