Arabidopsis lyrata (lyrate rockcress): 9298592
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Entry
9298592 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: GPI transamidase component PIG-S
KO
K05291
GPI-anchor transamidase subunit S
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
9298592
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
9298592
NCBI-ProteinID:
XP_020868838
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All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MEETSDRLNPGITPEFDPKXRSTKPGLKRPFITTSVLFSFLLGVPFLWKSVEIYRSPLPF
HDIDSLSDQIESTPLRFPCNFHAVFVGFRSTDPDNLRSQIQDGINQLTHQNSQCGSCNFS
LSVTVQNRDDQCSETLAHSSTTCSYRCGVIKRNVFGVGVDDTVDESLNDVFSGCSEESGK
MYSVVVVNKENANGEDEVKAVVGKGRHAWIVGNGLEERYGDMVARVSEIFVKVFMNGGRE
EDSIQGEFMPVGSDGRIVLSFSLLNSNPRDWVYDWDFQRIDEALLAPVTKALAPIANISV
ESQVLYHTPKSSFSSWDKKLQSYIFRTSALPFFVNSNEWHLDTSAGASGRSKILQFVVYI
PSGKECPLLLQLPNGEISKTNGFISPIWGGVIVWNPGNCDKDSESSSRNTISPQDLEQIV
EIFLGQFRQLFGFKSEAFYTSGLGTYKILPSDRGFTEWELDVLSTKHTCFNLHSCSTTLG
SLSRLVRSLPRMIIKDEIGEQVKYSLKAAKLAQSNASLGEYSSSASSSREARSLAENAFF
HPSIMSVSYFSYEHCFAVYSPFFLPVAGHVVLAALREWKRYKQEKAKYLTWLTRKKTA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacctccgatcgtctgaatcctggaatcacgccggagtttgatccgaagntg
cgttctactaaacctggattgaagcgtcccttcatcaccacctctgtgctcttctcattc
cttttaggtgtgccatttctgtggaagtcagtggaaatatatcgctctccgttaccgttc
cacgacatcgattcgctttccgatcaaattgagtctactcctttgcgtttcccttgcaat
ttccacgctgtattcgtcggtttccgatcgacggatccggataacttgcgatctcagata
caagatggtataaatcagttaactcatcaaaattcacaatgtggttcctgcaatttttcc
ctctctgtcaccgttcagaaccgagatgaccagtgctctgaaacacttgcgcacagttct
actacgtgctcttaccgttgtggagtgatcaaaagaaatgtttttggtgttggagtggat
gatacagtggatgagtcactgaatgatgtgttcagtggctgttctgaggagagtgggaaa
atgtacagtgttgttgtggtgaacaaagagaatgccaatggtgaagatgaggtaaaagct
gtggtgggcaagggaaggcatgcgtggattgtggggaatggattagaagaaagatatggt
gacatggtggctagagtttctgagattttcgttaaggtgtttatgaatggtggaagagaa
gaagactcaattcaaggagagtttatgcctgtgggatcagatgggaggattgttctttcg
ttcagtctattaaattctaatccacgtgattgggtctacgattgggactttcaaaggata
gacgaggcattgttggctcccgtgactaaagccttagcacctatagctaatataagtgtt
gaaagtcaggttttgtatcatacaccgaagtcttcgttttcatcttgggataaaaaactt
cagagctacatctttaggaccagtgctcttccctttttcgtgaattcgaacgaatggcac
ttggatacttctgctggagccagtggacggtccaaaatactgcaatttgtggtatatatt
ccatccggaaaagaatgccctcttcttttgcagttgccaaatggggagatatctaaaaca
aatggcttcatatctccgatatggggcggtgtgattgtgtggaacccgggaaattgtgac
aaggactctgaaagctcaagtaggaacacgatatcgcctcaggatctcgagcaaatagtt
gaaattttcttgggacaattccgacaactatttggctttaagtctgaagccttttatacc
agtggattgggcacttacaagattctacctagtgacagaggctttacagagtgggaattg
gatgtcttgtcaacgaagcacacatgcttcaatctccattcttgttcaacaaccctcggt
tctctctctagattggttcggtcactccccaggatgattatcaaggatgaaattggagaa
caagtgaaatattctctgaaagcagcaaagttggctcagtctaatgcttctttgggagaa
tacagttcttcagccagttcatcaagagaagcaaggtctctagccgagaatgccttcttc
catccatctatcatgtccgtcagctacttctcttatgaacattgctttgcagtgtactcg
ccatttttcctgcccgtggcaggacacgttgtccttgcagcactacgagaatggaagaga
tacaaacaagagaaggcaaagtacttgacatggctaaccagaaagaagacggcctag
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