Arabidopsis lyrata (lyrate rockcress): 9298701
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Entry
9298701 CDS
T01578
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144
Endocytosis
aly04517
IgSF CAM signaling
aly05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
9298701
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9298701
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
9298701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9298701
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aly04812
]
9298701
Membrane trafficking [BR:
aly04131
]
Others
Actin-binding proteins
Arp2/3 complex
9298701
Cytoskeleton proteins [BR:
aly04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
9298701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Tricorn_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_NUP159_NUP214
RMC1_N
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
eIF2A
BNR_3
B-prop_COPA_B_2nd
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
9298701
NCBI-ProteinID:
XP_020871544
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MAVVDVHRFAESITCHAWSPDHSMVALCPNNTQVHIYKSSSLDQWERLHVLQKHDQIVSG
IDWSSKSNKIVSVSHDRNSYVWSLDGGEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVD
TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL
AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSNSSY
SSQFSEAFGKFYGSQSKSATANDASESRGRVHDNCINSIVPLSKAGSPKVMRFSTSGLDG
KVAIWDLENMEQELGNQF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggatgttcatcggttcgctgagtcaatcacttgccatgcgtggagtcct
gatcactccatggttgctctctgtcctaacaatactcaagttcatatctataaatcatca
tctctagaccagtgggagaggttacatgtcctccaaaagcatgaccaaattgtttctgga
attgactggagctcaaaatccaacaaaatcgtcagtgtttctcatgacaggaactcgtac
gtgtggagcctggacggaggtgagtgggtaccaactcttgttattcttagactaaatcgt
gctgcactttgtgtccaatggagcccgaaagagaacaagttcgctgttggaagtggtgct
aaaactgtttgtatttgctattacgagcaagagaataactggtgggtcagtaaacttatc
cggaaaaggcacgaatcttcagtcacatctgttgcttggcatcctaataatattcttctg
gcaacgacatctacagatggaaaatgtcgggtattttcaacattcatcaaaggagttgat
acaaaggattcaaaagcaggctcaccagcggaaactaaatttggggagcaaattcttcag
cttgatctctcatattcttgggcatttggtgtgaaatggtctccaagtggaaacacctta
gcttatgtaggccatagctccatgatttactttgttgatgatgttggtccttctccttta
gcccaaagcgttgcattccgagatttgcctcttcgtgatgtcctgtttatttctgagaaa
atggtgataggtgttggatatgacagcaatccaatggtatttgctgcagatgatactgga
atatggagctttatcagatacatcggagagaagaaagcggcatcttcaaattccagttac
agttcgcagttttccgaagcatttggaaaattctacggtagtcaatcaaagtctgcaaca
gccaatgatgcttctgaatcacgtggacgcgttcatgataactgcataaattctattgtg
cctctgagcaaagcagggagtcctaaagttatgcgattcagcacttcaggattggatggc
aaagtagccatatgggatctggagaacatggaacaagaacttggcaatcagttttaa
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