Arabidopsis lyrata (lyrate rockcress): 9299444
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Entry
9299444 CDS
T01578
Name
(RefSeq) farnesyl pyrophosphate synthase 1, mitochondrial
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00900
Terpenoid backbone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
9299444
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aly01006
]
9299444
Enzymes [BR:
aly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
9299444
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
9299444
Prenyltransferases [BR:
aly01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
9299444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
9299444
NCBI-ProteinID:
XP_002863368
UniProt:
D7MPY7
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MSVSCRNLGKTIIKARPLHQRRLGVSIYRRRIQSSSSMEADLKSTFLNVYSVLKSDLLHD
PSFEFTDESRLWVERMLDYNVRGGKLNRGLSVVDSFKLLKEGKDLTEQEVFLSCALGWCI
EWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRGMPY
YVDLVDLFNEVELQTACGQMIDLITTFEGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVAC
ALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVK
ALERCSEEQTKILYENYGKADPSNVAKVKDLYKELDLEGVFMEYESKSYEKLMGVIEGHK
STAIQAVLKSFLAKIYKRQK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgagttgtaggaatctggggaagacaataataaaggctcgacctttacatcag
aggaggcttggtgtgagtatctatcgtcgtcgtatccaaagctcttcttcaatggaggcc
gatctcaagtcaacctttctcaacgtttattccgttctcaagtccgacctccttcacgac
ccttccttcgaattcaccgatgaatctcgtctctgggttgaacgtatgctcgactacaat
gtacgtggagggaaactcaatcgcggtctctccgttgttgacagcttcaaacttttgaag
gaaggcaaagatttgactgagcaagaggtttttctctcttgtgctctcggttggtgcatt
gaatggcttcaagcttatttccttgtacttgatgacattatggataactctgtcacccgc
cgtggccaaccttgctggttcagagtacctcaggttggtatggttgccatcaacgatggg
attctgctacgcaatcacatccacaggattctcaaaaagcacttccggggaatgccttac
tatgttgacctcgttgatttgtttaatgaggttgagttgcaaacagcttgtggccagatg
atagatttgatcaccacctttgaaggcgaaaaggatttgtccaagtactcattgtcaatt
caccggcgtattgtccagtacaaaacggcttattactcgttttatctccctgttgcttgt
gcattgcttatggcgggtgaaaatttggaaaaccatattgatgtgaagaatgttcttgtt
gacatgggaatctacttccaagtgcaggatgattatctggattgttttgctgatcccgag
acgcttggcaagataggaacggatatagaagatttcaaatgctcgtggttggtggtcaag
gcattagaacgctgcagcgaagaacaaactaagatattatatgagaattatggtaaagcc
gacccatcaaacgttgctaaagtgaaggatctctacaaagagcttgatcttgagggagtg
ttcatggagtatgagagcaaaagctatgagaagctgatgggagtgattgagggtcacaaa
agtacagcaatccaagcagtgctaaaatccttcttggctaagatctacaagaggcagaag
tag
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