Arabidopsis lyrata (lyrate rockcress): 9299491
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Entry
9299491 CDS
T01578
Name
(RefSeq) la-related protein 6A isoform X1
KO
K15191
La-related protein 7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9299491
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
9299491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PHM7_cyt
Hen1_LCD
RRM_ACIN1
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
9299491
NCBI-ProteinID:
XP_020878623
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MSSLPLRSGEKMATPSISDAVPLKAPEDATADFSQTQSPSLEVDSLPVAESSSDDVVVDV
SEIPSLSPSDDDFYHERNSGEDRDQDHGENLVETDVAAVPIDVLKQKIIRQVEYYFSDEN
LPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSSDEKKVK
RLSPLPEVRDPKIFTVLVENLPEDHSDENIREIFGKAGSIKSVSICDPNAAEEPEKGAKK
EKFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQTGKFAQRRPARREVDK
EKDNTGRVHDQTEGEKNKKTREHQHHRHPHSDNTADDDGGNHQKDKNGNKGRGGGQGRRQ
NHQGGNGIGHGTAPAASSSSHHNYHPVEVSKRPPGPKMPDGTRGFTMGRGKAISPPPPTS
AQTSHEV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcttcctcttcgctccggtgagaagatggcaaccccttccatctccgacgcc
gttcctcttaaggcaccagaagacgcgaccgcggatttttcccaaacgcaatcgccgtca
cttgaagttgattcgttaccagttgctgaatcttcttccgatgatgttgttgttgatgtc
tcggagataccgtctttatctccgtcggatgatgacttttaccacgagcgaaatagcggc
gaggatcgcgatcaggatcacggcgagaatcttgttgagaccgacgttgctgctgttcca
atcgatgtgttgaagcagaagatcattagacaggttgaatactactttagtgacgagaat
ttgcctactgacaaatttcttctgaatgctatgaagagaaacaaaaaaggctttgttcct
atttctaccattgctacgttccacaaaatgaagaagcttactcgagatcatgctttgata
gtatcagccttaaaggagtcatcgtttcttgttgttagctctgatgagaagaaggtgaag
cggctgagtcctcttcctgaggttagggatccgaagattttcactgttttggtagaaaat
ttgccagaggatcattcagatgagaatattcgggagatatttggtaaagctggaagcata
aaaagtgtatccatatgtgatccaaatgctgctgaagaaccagagaagggtgctaagaag
gaaaaattcatcagaaccagattacatgcctttgtggagtatgaaacggtggaggcagct
gaaaaagcggcagctacattgaataatgagcaagactggagaaatgggttgcgagttaag
cttcttgaacagacaggaaagtttgcacagagaagaccagctaggagagaagtcgataaa
gaaaaggataatacaggccgagttcatgatcaaactgaaggagagaagaacaaaaagacg
cgtgaacatcagcatcaccgtcaccctcattctgataatactgctgatgatgatggtggc
aatcatcagaaggataaaaatggaaacaaaggcagaggtggaggacaaggaaggcgacag
aatcatcaaggtggcaacggtattggacatggaacagcaccagcagcttcatcatcttct
catcataattatcatcctgttgaggtctcaaagcgaccacctggcccgaaaatgcctgat
gggacgagggggttcacaatggggcgtggtaaagcgatttctcctcctcctcccacatct
gctcaaaccagtcatgaagtttga
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