Arabidopsis lyrata (lyrate rockcress): 9299495
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Entry
9299495 CDS
T01578
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9299495
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
9299495
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Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
9299495
NCBI-ProteinID:
XP_020889048
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MVERGKRTHNRSRDNNNDNNRNQKRRLSYETEEKTDNKDDLVVVYRILCPSGVMGSVIGK
SGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKKDIIDIEHSELNYSIPLCSAQ
DALLKVHDAIVASLATAAENTKIDRDDIRECRLLVPSSQCSNVIGKSGSIIKKIRSRTRA
NVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAVSAIMYKVSPREQIPLDTTVQ
EVPASIIIPSDLSIYPQGGLYPNQDPIFQHGANVSSFIGTLPQGYGESAANPMPVFSASA
LPVVHGFGGSSKSEKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDD
DCVITVTATESPDDLKSMAVEAVLLLQEKINDEDEEKVKMQLLVPSKVIGCIIGKSGSII
SEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREI
GSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSMLPSSG
GLYGYGSFPVGNNSYGSKSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRR
ISGAMIEISDSKNSHGGRIALISGTPEQKRTAENLFQAFIMST
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcgtgggaagaggactcataatcgttctagagacaataacaatgacaacaat
aggaaccaaaagagaagactttcttacgaaaccgaagaaaagaccgataacaaagacgat
cttgttgttgtttacagaatcttatgccctagtggagtcatgggaagtgttataggcaaa
agtggcaaagttattaacttgattaggcaagaaactagagctagaatcaaagttgttgat
ccttttccaggttgtagcgaaagagtcataacgatcttttgctcggttacggagaagaaa
gacattatcgacattgagcatagcgaattgaattactcaattcctttgtgttctgctcaa
gatgctcttcttaaagtccatgatgctattgtggcttctttagctactgctgctgagaac
actaagattgatagagatgatattagagaatgtcgccttttagttccgtctagtcaatgt
tctaatgtcattggtaaatccggttctattattaagaagattaggagtagaactagagct
aacgttaaggttgtctctaaagatgtttcggatccttcacacacttgtgctatggatttt
gacaacatcgttttgatatctggtgagtctgaatctgtgaagaaggcacttttcgctgtt
tctgcaatcatgtacaaagtcagtcctcgagaacagattcctctggatacaactgtccaa
gaagttcccgctagtattataattccgtcagatctatctatctatccacaaggcggttta
tacccaaatcaggatcctattttccaacatggggccaatgtttcatcgtttatcggtaca
ttgcctcagggttatggagaaagcgctgcaaatccaatgccggttttttctgcttctgct
cttcctgtggttcatggttttggtgggtcttccaaatcagaaaagttggttataaaagtt
atttgctcttcttccaaaatcggccgtgttatcgggaaaggaggatcaaccattaaggga
ataagacaagcaagcgggtctcacatcgaggttaatgactcgagggcaaatcatgatgat
gactgtgttatcactgtcactgctacagagtctcctgatgatttgaagtctatggcggtt
gaagctgttcttctacttcaagagaaaattaatgatgaagacgaggaaaaagttaaaatg
caacttcttgtaccttctaaggtaataggatgcattatagggaaaagtggctcaatcata
agtgaaatcaggaaaaggacgaaggccaatattcacatctcaaaagggaataataagcct
aagtgtgccgatcccaatgatgagctcgttgagatatcgggtgaagtaagcgatgtgaga
gatgctcttattcagatagttctgaggcttcgagatgatgtattaagggatagagagatt
ggttccaggaatcaacctcctgcaagatctgagaataacaatttcttctcttcgggtagc
agtaatactggtcttgcacttccttcatctttcatgtcttctgttccgcaagttgcttct
gtagatttcgataggagaccagaaactgggagcagcatgagcatgcttccttcgagcggt
ggactctatggttatggaagttttccggtgggcaataacagttatggatccaagtcttct
tactcatccaatctatatggaggattgcctcaatctactactatggaggttcgaatccca
gctaatgcagtgggtaaagttatgggcagaggaggaggcaacttggataacataagaagg
atatcaggagctatgatagaaatttctgattccaaaaattcccatggcggtcgcattgct
ctcatttccggaacacctgaacaaaagcgtaccgcagagaacttgttccaagcttttatc
atgtccacttga
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