Arabidopsis lyrata (lyrate rockcress): 9299991
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Entry
9299991 CDS
T01578
Name
(RefSeq) pre-mRNA-splicing factor CWC24
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9299991
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9299991
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9299991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-Nse
Rtf2
Prok-RING_4
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
9299991
NCBI-ProteinID:
XP_020865594
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MNSQEVRVPRGNRRRKAVIDLNAVPGDQEGTSASVRSPTVPTTPSQPAPTMIDVDAIEDD
VIESSASAFAEAKSKSRNARRRPLMVDVESGGTTRLPANISNKRRRVPSSEPVIDCEHAY
VNDEVNMSSRMSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQG
KCPTCRKKVTAKELIRVFLPATR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacaagaggtgagagttcctcgaggaaatcgacggaggaaagctgtgattgat
ctgaatgctgtacctggagatcaagaagggacctctgcttctgtaagatctcctacggtg
cctactacaccgtctcagcctgctcctacaatgattgatgtcgatgctattgaagatgat
gttattgaatcatccgctagtgcttttgctgaagctaaaagcaaatcgagaaatgcacgt
cggagacctttgatggttgatgtagagtcaggaggtacgactagattgcctgccaacata
agcaacaaacgcagaagggttccttctagtgaacctgtcatcgactgtgagcatgcatat
gtaaatgatgaagtcaacatgtcttcgagaatgtctagatcaaaggctccagctcctcca
ccagaagagccaaagtttacatgtccaatctgcatgtgtccctttacagaggagatgtca
actaagtgcggtcacatcttctgcaagggatgtataaagatggcaatatctcgccagggc
aaatgcccgacttgtaggaaaaaggttactgcgaaagagctgatccgagtattccttcca
gccactagatga
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integrated database retrieval system