KEGG   Arabidopsis lyrata (lyrate rockcress): 9299991
Entry
9299991           CDS       T01578                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC24
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9299991
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9299991
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    9299991
SSDB
Motif
Pfam: zf-RING_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-rbx1 zf-C3HC4_4 zf-Nse Rtf2 Prok-RING_4 zf-ANAPC11 zf-RING_10
Other DBs
NCBI-GeneID: 9299991
NCBI-ProteinID: XP_020865594
LinkDB
Position
Unknown
AA seq 203 aa
MNSQEVRVPRGNRRRKAVIDLNAVPGDQEGTSASVRSPTVPTTPSQPAPTMIDVDAIEDD
VIESSASAFAEAKSKSRNARRRPLMVDVESGGTTRLPANISNKRRRVPSSEPVIDCEHAY
VNDEVNMSSRMSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQG
KCPTCRKKVTAKELIRVFLPATR
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaactcacaagaggtgagagttcctcgaggaaatcgacggaggaaagctgtgattgat
ctgaatgctgtacctggagatcaagaagggacctctgcttctgtaagatctcctacggtg
cctactacaccgtctcagcctgctcctacaatgattgatgtcgatgctattgaagatgat
gttattgaatcatccgctagtgcttttgctgaagctaaaagcaaatcgagaaatgcacgt
cggagacctttgatggttgatgtagagtcaggaggtacgactagattgcctgccaacata
agcaacaaacgcagaagggttccttctagtgaacctgtcatcgactgtgagcatgcatat
gtaaatgatgaagtcaacatgtcttcgagaatgtctagatcaaaggctccagctcctcca
ccagaagagccaaagtttacatgtccaatctgcatgtgtccctttacagaggagatgtca
actaagtgcggtcacatcttctgcaagggatgtataaagatggcaatatctcgccagggc
aaatgcccgacttgtaggaaaaaggttactgcgaaagagctgatccgagtattccttcca
gccactagatga

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