Arabidopsis lyrata (lyrate rockcress): 9300002
Help
Entry
9300002 CDS
T01578
Name
(RefSeq) 3-ketoacyl-CoA thiolase 5, peroxisomal isoform X1
KO
K07513
acetyl-CoA acyltransferase 1 [EC:
2.3.1.16
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00071
Fatty acid degradation
aly00280
Valine, leucine and isoleucine degradation
aly00592
alpha-Linolenic acid metabolism
aly01040
Biosynthesis of unsaturated fatty acids
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01212
Fatty acid metabolism
aly04146
Peroxisome
Module
aly_M00087
beta-Oxidation
aly_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
9300002
00592 alpha-Linolenic acid metabolism
9300002
01040 Biosynthesis of unsaturated fatty acids
9300002
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
9300002
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9300002
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
9300002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
ACP_syn_III_C
Thiolase_C_1
DUF5308
Motif
Other DBs
NCBI-GeneID:
9300002
NCBI-ProteinID:
XP_002865685
UniProt:
D7MMN3
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MEKAVERQKILLRHLNPISSTNSSLNHEPSLFSLVNCASEVSPMAAFGDDIVIVAAYRTA
ICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRVAAY
FAGFPDTVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGFHAS
NPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAITSGKLKDEII
PVATKIVDPETKAEKAIVVSVDDGVRPNSNLADLAKLKTVFKQNGSTTAGNASQISDGAG
AVLLMKRSLAMKKGLPILGVFRSFAVTGVDPSVMGIGPAVAIPAATKLAGLNVSDIDLFE
INEAFASQYVYCCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRF
GVISMCIGTGMGAAAVFERGDSVDNLSNARVANGDDH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagctgttgaaagacaaaagattttgcttcgtcatctcaatccaatttcttct
actaattcttctcttaatcatgaaccttctcttttttctcttgtgaattgtgcttctgag
gtttccccaatggctgcttttggagatgacattgtgattgtagcggcatatcgtaccgcc
atttgcaaagcaagacgtggaggtttcaaagacactcttcctgatgatcttctagcttct
gttcttaaggctgtagtggaaagaacatctttggatccaagtgaagttggggatatcgtt
gttggtaccgtgatagcgcccggttctcagagagctatggaatgtagagtagcagcttat
tttgctggttttcctgacaccgtgccagttagaactgtcaatagacaatgctcatcagga
ctacaagcagttgctgatgttgctgcttccattagagctggttattacgacattggtatt
ggtgctggagtggaatcaatgtcaactgatcatattcctggaggtggctttcatgcctct
aatccaagagcacaagatttcccgaaagctcgtgattgtttgcttccaatgggaattact
tctgaaaacgttgcagaaagattcggtgtcacaagagaagagcaagatatggctgcggtg
gagtctcacaaacgcgctgcagctgcaatcacgtctggtaaactcaaggatgaaataatt
cctgttgctactaagattgtggaccccgagactaaagcagagaaggcaattgttgtatct
gttgatgacggtgtacgtccaaactcaaacttggcagatctggcaaagctgaagaccgtc
tttaaacagaacggttccaccacagctggtaatgctagccagatcagtgatggtgctgga
gctgtactgctaatgaagagaagtttggcaatgaagaagggacttcccattcttggagtg
ttcaggagctttgctgttactggtgtggatccatctgtaatgggtatcggtccggctgtt
gccattcccgctgcaactaaacttgcaggcctcaacgtcagcgatattgatctattcgag
atcaatgaggcatttgcatctcagtatgtgtactgttgcaaaaagctagagctagatatg
gaaaaggtcaatgttaatggaggagccattgctattggccatcctctgggtgctacagga
gctcgatgtgttgcgacattgttgcatgagatgaagcggagagggaaagattgccgcttt
ggagtaatctcaatgtgcataggcactggaatgggagctgcagctgtttttgagagggga
gactctgttgataacttgtccaacgctcgagtggctaatggtgatgatcattag
DBGET
integrated database retrieval system
