Arabidopsis lyrata (lyrate rockcress): 9300005
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Entry
9300005 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9300005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9300005
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
9300005
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
9300005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
9300005
NCBI-ProteinID:
XP_020871647
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MDRERHKRRKQSATVNKKYLVHDSPSIVTMEKEQVVTEFEVIPPSDANEVFTLNAAIDMK
DKDTPLRANAGWKEAMCTGGTENEVPLAFGSDSECQTEEFDLEADGSLLFYILDACEKPF
DASMGTIYLLRKVKVKKGDTYKSCCVVVNNIQRCVYAIPNDSIFPSHELMTLEQEVKESR
LSPESFRGKLHEMASKLKKEISQQLLQLNVSNYSMAIVKRNYAFDRPDVPTGQQYVLKIN
YSFKDPPLPEDLKGESFCTVLGSHTSALELFILKRKIMGPSWLKISVFSPPSQRVSWCKC
EVTVESPKVITVSIPKEKTVHPPAVVTAINLKTIVNEKQNISEIVSAAVLCFHNAKIDVP
MPGPERKRSGVLSHFTVVRNPEGTGYPIGWKKEVADRNSKNGCSVLSFENSECALLTRFF
DELNNLDSDVLVGHNISGFDLDVLLRRAQACKVKSNIWSKIGRLKRSFMPKLKGNTNFGS
GATPGLMSCIAGRLLCDTDLCSRDLLEQQVSYSLIDLSKTQLNRDXPNDIPKMFQSSKTL
VELIECGETDAWLSMELMFHLNVLPLTLQLTNISGNLWGKTLQGGSAQRNEYYLLHTFHS
KKYILPDKISQHMKERKSSKRRINHGPEDHNVDDPSKGNKTKKGPAYAGGLVLEPKKGLY
DKYVLLLDFSSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTPGILPKLMEHLVSIRKCV
KLKMKKETDLKCRELDIRQKALKLTANSLYGYLGFSNSRFYAKPLAELITLQVXFCFLVI
NFLCFSLLFCDPVNSQTLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIKEVK
AIGAKVIQEVNKKYRCLKIELDCIYKRMLLLRKKKYAAIKLQFKDGKICEDIERKGVDMV
RRDWSLLSKEIGDLCLAKILYGGSCEDVVEAIHNELMKIKEEMRNGQVALEKYVITKALS
KSPEAYPDSKSQPHVQVALRMRQRGYKKGFSAKDTVPYIICYEQGSTSLASSAGIAERAR
HPDEVKSDDNRWLVDIDYYLSQQIHLVVSRLCAEIQGTSPERLAECLGLDPSKYRSRSNV
TTCSDPSTSLLCATSYEERYKSCEPLALACPSCSAAFNCPSITTSVCASISNKSETEESD
SIFWLKLRCPKCEAEGSTRRISPAMIANQVKRQIDGFVSMYYKDIMMCDDESCKYTTRSP
NFRLLGDCERGTVCPNYPNCRGTLLRKYTEADLYRQLSYFCHILDTQCSLEKMDVGVRIQ
VEKAMTKIRPAVESAASMARSIRDRCGYGWLQLTDIAI
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggatagagaaaggcataagcgaaggaaacaatcagctactgtgaataagaaatatctg
gttcatgattcaccctcaattgttaccatggagaaagagcaagtcgtgacagaatttgaa
gtcatccctccaagtgatgccaatgaggtctttacattgaatgcagcaattgatatgaaa
gacaaggacacgcctttaagagccaatgctggttggaaagaagccatgtgcacaggtgga
actgagaatgaggttccacttgcttttggttctgattctgaatgccaaacggaagaattt
gatttggaggctgatggatcacttcttttttacattcttgacgcttgcgagaagcctttt
gacgctagtatgggtacaatatatctcttaaggaaggtcaaggttaaaaagggagatacg
tacaagagttgctgtgtggtagttaataatatccagagatgtgtttatgctattccaaat
gattcaatctttccttcccatgaactaatgactctcgagcaagaggtgaaagagtctcga
ctttctcctgaatccttccgagggaagttacatgaaatggcatcaaaactgaagaaggaa
atttctcagcaattgttacaactcaatgtttcaaattatagcatggcaattgtcaagaga
aactatgcatttgacaggcctgatgtgcctactggccaacaatatgttttgaagataaat
tattcatttaaggatcctccacttccggaggatcttaaaggggagtctttttgcactgtg
ctcggctctcataccagtgctttggagctttttatcctcaaaaggaagatcatgggacct
tcttggctcaaaatttcagtcttttctccaccatctcaacgagtgagctggtgcaagtgt
gaggttacagttgaatctcccaaggttatcactgtttcaattccgaaggaaaaaacggtt
catcctcctgctgtcgttacagccattaacctaaagactatagtcaatgagaagcagaac
atcagcgaaattgtttccgcggctgttctctgctttcacaacgccaagattgatgttcca
atgccaggtccagaaagaaagcgatctggtgttctgagtcatttcactgttgtcaggaat
cccgaaggaaccggctacccaattggttggaaaaaagaagtggctgacagaaattcaaag
aacggctgcagtgttttgagttttgaaaacagtgaatgcgcgttgctgacccgatttttt
gatgagttgaacaatttggacagtgatgttcttgtaggacataatatatccggttttgat
ctggatgtccttctccgaagagcccaggcttgcaaagttaagagtaacatatggtccaaa
ataggccgtctcaaacgctctttcatgcctaagcttaaagggaacactaattttgggtcc
ggagctacaccagggcttatgtcttgcattgctggaagactcttatgtgatactgatcta
tgttctcgtgacttgttggagcagcaggtcagttattcgttaatagacctttcaaagaca
cagctaaaccgggacnagcctaatgatattcccaaaatgtttcagtcatctaaaacactt
gtggaacttattgaatgtggtgagacagatgcatggttatccatggagctcatgtttcat
ctaaatgttcttcctctcactctccagcttaccaacataagtggcaatctctgggggaaa
actcttcagggaggcagcgcgcaaagaaatgaatactacttactacatacattccactcg
aaaaagtacattctcccagacaaaatatcgcaacatatgaaggaaagaaagtcatcaaaa
agaagaatcaatcatggtccagaagaccacaatgtagatgatccgtctaagggcaacaaa
acaaagaagggtccagcctatgctggtggattggtcttggagccaaagaaaggcttatat
gacaaatatgtgttgcttctcgatttcagtagtctttacccgtctattatacaggaatat
aatatttgtttcacgactataccacgatcagaagacggtgttcctcgtttaccttctagt
cagactcctggaattcttccaaagttgatggaacatttggtcagtataaggaaatgtgtc
aaactaaagatgaagaaggaaacagatctcaagtgccgggagcttgacattcggcagaag
gcattaaagctcacagccaatagtttatatggatatcttgggttttctaattcaagattc
tacgctaagcctttagcagagctcataacactacaggtanagttttgctttctagtgata
aattttctttgcttttctctgctcttttgtgatccggttaattcccaaacattgcaggga
agggagatactgcaaagaactgtggatcttgtccagaatcatttaaacctagaggttatt
tatggtgacacagattcaatcatgattcacagtggactagatgatataaaagaggtcaaa
gccattggagcaaaagtcatccaagaggtcaataagaagtatagatgtctgaagattgaa
cttgattgcatatataagagaatgcttcttcttagaaaaaagaagtatgctgccatcaag
ttgcagttcaaggacgggaagatttgcgaggacatcgaaaggaaaggtgtggacatggtt
cgtcgagattggagcttgctctccaaggaaattggagatttatgcttggctaaaatcttg
tatggagggtcgtgtgaggatgttgttgaagcaattcataacgaacttatgaagataaaa
gaggaaatgagaaatgggcaagttgcacttgagaagtatgtcatcaccaaggcattgagt
aagtcaccagaagcttatccagattccaaaagccaaccacacgttcaggtcgcactcaga
atgaggcaacgtggttataaaaaaggtttcagtgctaaggataccgtaccgtatataatc
tgctatgaacagggtagtactagcttagcaagctcagcagggattgccgaacgtgctagg
catcctgatgaggtgaaatcagatgacaacagatggttggttgacatagattactacttg
tcacagcagattcatctggtggtatctcgtttatgcgcagagattcagggcacaagtcct
gagaggttagctgagtgtttaggacttgacccatcaaagtatcgaagcagatcaaacgtt
actacgtgcagtgatccttctacatccctcttgtgtgctacaagctatgaagaaagatat
aaaagctgtgagccattagcattagcatgccctagctgctcagctgctttcaactgtcca
tcgattactacctcagtttgtgcgtcgatcagtaacaaatctgaaacagaggaatctgat
tctatattctggcttaaactgcgttgcccgaaatgcgaagcagaaggtagcacgagaaga
atatcccctgcaatgatagctaaccaggtgaaaaggcagattgatgggtttgtgtcaatg
tactacaaagacataatgatgtgtgacgatgagtcttgcaaatacacgacacgcagcccc
aactttcgtctgctcggtgactgtgaacggggaaccgtttgcccaaactatcctaactgt
cgtggaaccctcttaagaaagtacactgaagcagacttgtacaggcagctatcatacttt
tgccacatcttagacacacaatgctctctagaaaagatggatgttggtgtcagaattcaa
gtagagaaagcaatgacgaagataagacctgcggttgagtcagcagcatccatggctcga
agtatacgagaccggtgtgggtacggatggctgcaactgacagacatagccatttga
DBGET
integrated database retrieval system
