Arabidopsis lyrata (lyrate rockcress): 9300096
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Entry
9300096 CDS
T01578
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9300096
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9300096
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9300096
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
9300096
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
9300096
Ion channels [BR:
aly04040
]
Chloride channels
Chloride channel (CLC)
9300096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
9300096
NCBI-ProteinID:
XP_020883228
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MDDRSEEDHDIEVEGGAFQGYERKISGILDDGSVGFRQPLLARNRKNTTSQIAIVGANSC
PIESLDYEIFENDFFKQDWRSRKKIEILQYTFLKWALAFLIGLATGLVGFLNNLGVENIA
GFKLLLIGYLMAKEKYFQAFFAFAGCNLILATAAASLCAFIAPAAAGSGIPEVKAYLNGI
DAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYRLTWKWL
RFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALLWRTFFTTAVVAV
VLRSLIEFCRSGRCGLFGKGGLIMFDVNSGPVLYSTPDLLAIVFLGVVGGVLGSLYNYLV
DKVLRTYSMINEKGPRFKIMLVMAVSILSSCCAFGLPWLSQCTPCPTGIEEGKCPSVGRS
SIYKSFQCPPNHYNDLSSLLLNTNDDAIRNLFTSRSENEFHISTLAIFFVAVYFLGIITY
GIAIPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLGGTMRMTVSLCVI
LLELTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYMEDHAEPYMRNLVAKD
VVSGALISFSRVEKVGVIWQALKMTRHNGFPVIDEPPFTEASELCGIALRSHLLVLLQGK
RFSKQRTTFGSQILRSCKARDFGKAGLGKGLKIEDLDLSDEEMEMYVDLHPITNTSPYTV
LETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIDPLKTC
SFR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgtagcgaagaagaccatgatatagaggttgaaggaggagcttttcaaggt
tacgagaggaagatatctgggattctagacgatggatctgtcggatttcgacagcctctg
ctcgctaggaatcgaaagaacacaacttcgcagatcgctattgtcggagctaattcttgt
cccatcgaaagccttgattacgagatctttgagaatgattttttcaagcaagactggagg
tctaggaagaagattgagatacttcagtatacgtttctcaaatgggcgcttgcttttctt
attggtttagccactgggcttgttggctttttgaataatcttggtgttgagaatattgct
ggattcaaactcttgctcattggttatctcatggccaaggaaaaatattttcaggcattt
tttgcatttgctggttgtaacttaattttggcaactgctgctgcttcactctgtgctttt
attgctcccgcggcggcaggatctggcatacctgaggttaaagcatatctcaatgggata
gatgcttattcaatattagctccgagcaccctctttgttaagatctttggctctatattt
ggagttgctgccggatttgtagtcggaaaagaagggcctatggttcatactggtgcttgc
attgctaatttacttggtcaaggtggttccaaaaagtaccggttgacttggaagtggctc
agattcttcaaaaacgatagagacagaagagacctgatcacttgcggggctgctgctggt
gtagcagctgccttccgtgctccagttgggggagtgcttttcgcccttgaagaagctgct
tcatggtggaggaatgcccttctttggaggacgttcttcactaccgcagttgtagcagtg
gtcttacgaagtttgattgagttctgtcgatctgggagatgtggactgtttgggaaagga
ggtctcatcatgtttgatgtaaactcgggaccagtgctttatagcactccagatttgcta
gcaatagtatttcttggagttgttggtggtgtgcttggaagcctttacaactaccttgtg
gacaaagtcctccggacatatagcatgataaacgagaaaggtccaagatttaaaattatg
cttgttatggcagtttccattttgagctcatgttgcgcatttggtctcccatggctttca
cagtgtactccatgtccgactggcatagaggagggcaagtgcccaagtgtaggtcgatcc
agcatctataagagtttccagtgtcctccaaaccattacaatgacctttcctccctactt
ctcaacaccaatgatgatgcaatccgcaatcttttcacatccagatctgaaaatgagttc
catatctccacccttgccatcttctttgtggcagtatacttccttggcatcataacatac
ggcatagccataccctctgggcttttcatacccgtcattcttgctggagcctcttatgga
cgtctagtgggtagactgctgggtccagtatctcagcttgatgtaggtctgttttctctg
cttggagctgcttcattccttggaggcacaatgagaatgacggtctctctatgtgttata
ctgctcgaacttacaaataatctcctaatgctgccactggtgatgcttgtactcctaatc
tcaaaaacggttgcagattgtttcaacaggggggtctatgaccagattgtaacaatgaaa
ggattgccttacatggaagaccatgcagagccatacatgcgcaatttggttgcaaaggac
gtagtttctggagctttgatatccttttcgagagttgaaaaggttggggtaatatggcag
gctttgaagatgacaagacataatggtttccctgtaattgatgagccacctttcacagaa
gcttctgagttatgtgggattgccttgagatcccatctccttgtgcttctccaagggaag
agattttcgaagcagagaacaacttttggttcccaaattctgagaagttgcaaagcccgt
gactttggcaaagcaggattaggcaagggactcaagattgaagatttggatctaagtgat
gaggagatggagatgtatgttgatctccatcccatcactaacacatctccttacactgtg
cttgagactctgtctctagctaaagcggctattctttttcggcaactcggccttcgccac
ttgtgtgtggtgcccaaaacaccagggagaccgcctattgttggaatactgacaaggcat
gatttcatgccggaacatgtactgggactctaccctcacattgatcccctcaaaacttgt
tctttcaggtga
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