Arabidopsis lyrata (lyrate rockcress): 9300175
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Entry
9300175 CDS
T01578
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9300175
Enzymes [BR:
aly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
9300175
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
9300175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
9300175
NCBI-ProteinID:
XP_002865844
UniProt:
D7MQX8
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MKRKQQEDDGVEKAASPVVATTSNTMNTDLLLQSPSKLSQKQDYIFHGGRRHVRPYYFEF
ISHVNKRWTGKTIVDLFADEFKGRPREYYIGAVKSGRIKVDGEIVPVSYIVKSSQKITHF
LHRHEPPVMIDDVVILHQEPDVVTVCKPASVPVHPCGQYRKNTVVGILDAEHDLGTLFPI
HRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMIVDANINYNGS
EGRSTAEDPDSSGDDKKVKGKPACTKLTRIDTNGTHSLVSCEPVTGRTHQIRVHLQYTGH
PIANDPLYLNQHIDNLETYIAKRIDAGEKKIVSPDDYVYSSEDFSIDPMCTNCPKLIPQG
YEEHDEALWLHCVQYSGTGWEYECPYPSWASL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaagcagcaagaagacgacggcgtagagaaagccgcctctcccgtcgtcgcc
accacctcaaacaccatgaatactgacctacttctacagtcaccttccaaactatcacag
aagcaggactacatcttccatggaggaagacgccatgtgagaccatactacttcgagttc
atttctcatgtgaacaaacgctggacagggaaaacaattgtggatttgttcgccgacgaa
tttaaaggacgtcctcgtgaatattatattggtgcagtcaaatctggaagaatcaaagtt
gatggagaaattgtaccagtttcatacattgtgaaatcttcccaaaagattactcacttc
ctccacaggcatgaaccaccggtgatgattgatgatgttgttatccttcatcaagaacct
gacgttgttactgtctgcaaaccagcttctgttcctgtgcatccatgtggtcaatatcgt
aagaacacagttgttggcatccttgatgctgagcatgacctaggaactctatttcctatt
cacagattagaccgtttggtttctggattgctcatcatagcaagaacggcggctaaagca
gattttttcaggcaacagattgagggtggaatggtgaagaaacgttatattgcaaaggtt
attggcgtgttcccagaagatgagatgatagtcgacgccaacataaattataatggcagt
gaaggaagaagtacagcagaggaccccgattcaagtggtgatgataagaaggtgaagggg
aagcctgcatgcaccaagttaactagaatcgatacaaatgggactcatagccttgtctca
tgtgaaccagtgacagggagaacccatcaaatacgagtgcatctacaatatacagggcat
cccatagcgaatgaccctctttatctcaatcaacacatagataatcttgagacctatatt
gcaaaaagaatcgatgcaggtgagaaaaagatcgtctctccagacgactacgtgtattct
agcgaagatttcagcatcgatccaatgtgtacaaactgcccaaagttgatcccacaagga
tacgaggagcatgacgaggctctctggttacactgcgttcaatattctggaactggatgg
gaatacgaatgtccttatccatcttgggcatccctttag
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