Arabidopsis lyrata (lyrate rockcress): 9300238
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Entry
9300238 CDS
T01578
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04130
SNARE interactions in vesicular transport
aly04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9300238
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
9300238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9300238
Membrane trafficking [BR:
aly04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
9300238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
9300238
NCBI-ProteinID:
XP_020885969
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MVKLTIVGRVEDGLPLAQDQTYVNQQDNASFLLYKKQAEFLLKQISKDSLLHPKMTILLD
HHSFHFLVEKKICCIALSDSSYPRKLLFHYLQDLRKELDQPDETALIQKISKPYSFVRFG
KIIGRIRKQYMDTRTQANLSKLNSSRKQELNVVTEHFNDIIQRRQILETSEKASSDPRMS
VSTIWRSRCLQDIALKWTPVTTIILVILVLFKASLIMTDDYLISTMI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaactaacgatagttggtagggttgaagatggattgcctcttgcccaagatcaa
acctatgtaaaccaacaagacaacgctagtttcttgttatacaagaaacaagccgaattc
cttcttaagcaaatctccaaagactcattgttgcatccaaagatgaccatcttgctcgat
catcattctttccactttttggtggagaagaagatatgttgcatcgcgctatctgattct
tcgtacccaagaaagctattgtttcattacctgcaggatctgcgcaaggaacttgatcag
cccgatgagacagcactgattcagaaaatctcaaaaccttatagcttcgttaggtttggt
aagatcatagggagaataaggaaacaatatatggacacgagaacacaagctaatctatcg
aagctgaattcttcacggaaacaagaactaaatgtagtcactgagcattttaatgatata
atacaaagacgacaaattttagaaacatcagaaaaagcgtcctcagatccacgaatgtct
gtttcaaccatttggagatcacgatgtcttcaggatattgctttaaaatggacaccagtg
acgaccattattctcgttattcttgttcttttcaaagcaagcttgattatgacggacgat
tatttaatttcaaccatgatatga
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