Arabidopsis lyrata (lyrate rockcress): 9300314
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Entry
9300314 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9300314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9300314
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9300314
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
9300314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_RING
DUF7567
Motif
Other DBs
NCBI-GeneID:
9300314
NCBI-ProteinID:
XP_002864238
UniProt:
D7MSX7
LinkDB
All DBs
Position
Unknown
AA seq
182 aa
AA seq
DB search
MVLMETDSIECLIDNDEIHHIHQFSSTKSQAGATVVISPATSVYELLECPVCTNSMYPPI
HLVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEEDARKYTYSLEVGGSGRKLTWEGT
PRSVRDSHRNIRESHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGVCIPNL
CV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatggagacagatagtatcgaatgcttgatcgataacgatgagatccatcac
atccaccaattctcatcaaccaagtctcaggccggagccaccgttgtaatctctccggcg
acgagcgtttacgagctccttgaatgcccagtctgcaccaattcaatgtacccaccaatt
catctggtatttcattgttttggacaatacttttgtcttcattttgaagcgtttcagctc
ggtatggctccagtatacatggcgtttctgagattcatgggagatgaagaagacgcacga
aaatacacttacagtttagaagttggaggcagtgggagaaaactcacatgggaaggaaca
ccaagaagtgtccgagatagtcacaggaatatcagagaaagtcacgacggtctaataatc
caaagaaacatggcactcttcttttcgggtggagaaaggaaagaactgaaattaagagtc
accggaagaatctggaaagagcaacagaatccagattctggtgtttgcataccaaacctc
tgtgtgtag
DBGET
integrated database retrieval system
