Arabidopsis lyrata (lyrate rockcress): 9300512 Help Entry 9300512           CDS       T01578                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03013   Nucleocytoplasmic transport aly03040   Spliceosome Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     9300512   09122 Translation    03013 Nucleocytoplasmic transport     9300512  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aly03019]     9300512    03041 Spliceosome [BR:aly03041]     9300512 Messenger RNA biogenesis [BR:aly03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      9300512 Spliceosome [BR:aly03041]  Complex C   Other components    EJC/TREX     9300512  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     9300512 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st eIF2A Beta-prop_HPS5 NBCH_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_DCAF12 TRM82_WD Tricorn_2nd WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_Nup120_160 PAC11 B-prop_COPA_B_2nd Beta-prop_ACSF4 TP_0598_N CNH Beta-prop_WDR11_1st PROPPIN DUF7099 WD_LRWD1 Motif Other DBs NCBI-GeneID:  9300512 NCBI-ProteinID:  XP_002866128 UniProt:  D7ML82 LinkDB All DBs Position Unknown AA seq 315 aa AA seqDB search MEETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDL ELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYKPDG THVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMAGDFFFLTTGLGTVEVLSYPS LKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTIS FNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKY NTDEGVFRIFGFESS NT seq 948 nt NT seq  +upstreamnt  +downstreamnt atggaggagacgacgattcctttcaagagcttacatagcagagagtatcaaggtcacaag aagaaggtacattctgtggcttggaattctaatggaacaaagcttgcttcgggttctgtt gatcaaacggctcgtatttggaacattgaacctcacggtcatagtaaggctaaggacctt gaactaaagggccatactgatagtgtggatcagctatgttgggaccccaaacattcagat cttgttgctactgcctctggtgataaaagcgttcgtctctgggatgctcgcagtggaaaa tgcacacagcaggcagaacttagtggagagaatataaacatcacctacaaacctgatggg actcatgtagctgttggtaatagggatgatgagcttaccattctggatgtccgtaagttt aaacctctacacagacgcaaattcaattatgaggttaatgagattgcttggaacatggca ggagattttttcttcttgactacaggacttggcactgttgaagttctttcgtatccatct cttaaaccacttgacactctcacagcccacacagccgggtgttattgtattgcaattgat cctaaagggagatattttgctgtcgggagtgcggattccttagtcagcctttgggatatc tcagacatgctttgtttgagaacatttaccaaacttgagtggcccgtcagaacaataagc ttcaactattcgggagagtatattgcttcagccagtgaggatttatttatagatattgct aatgtccaaaccgggcggacggtgcatcagattccatgtcgggctgccatgaacagcgtc gagtggaatcccaaatacaatttacttgcatatgcaggcgatgacaagaatcccaagtat aatactgatgaaggtgtttttcggatatttggttttgagagctcgtag

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