Arabidopsis lyrata (lyrate rockcress): 9300527
Help
Entry
9300527 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9300527
04121 Ubiquitin system [BR:
aly04121
]
9300527
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9300527
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
9300527
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9300527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
HypA
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
9300527
NCBI-ProteinID:
XP_020871324
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MEETMASRYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGGGGGRGIRDVQDSETD
FGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEENDDNGDELSNADGNDNNNNSNVYYH
HRARRHGGEIDLDREFESILRRRRRSSGNILQLLQGIRAGIASEYESSDNDWDNSRERDS
NNNRVIMINPYNQSLVVQGSSDQNPNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTP
PARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKELPCKHKFHIRCIVPWLELHSSCPV
CRFELPSSADDDDETKIDSERPPRTRNVGESNNRNIVENVGNAERGRQDEARSGNGRRFS
FPWPFSGLFSSSSSSSSSSSSGSQSAENNFYSRSSGSSR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcatctaggtattggtgtcacatgtgttcacaaatggtgaatcca
ataatggaatctgagatcaaatgtcccttttgtcaaagcggattcatcgaagaaatgagc
ggtaatagcggtggaggtggtggcagaggcataagagacgttcaagattcagaaaccgat
tttggaacagaccgtgcattgtctctatgggcaccaatcttgcttggaatgatgagtagt
cctcggagacgaagaaggtttagaagatcagagtttggtgaagagaatgatgataatggt
gatgaattgagtaatgctgatgggaatgataataataataacagtaatgtgtattatcat
catcgagctaggcggcatggtggagagattgatttggatagagagtttgagtctatcttg
aggcgaagacgaagaagctcggggaatatattgcagttacttcaagggattcgtgcaggg
attgcttcagagtatgaaagttctgataacgattgggataattctcgtgagagggatagt
aataacaatagagttataatgatcaatccgtataaccaatcgctcgttgttcagggatct
tcagatcaaaatccgaatcatccttcattgacttcacttggagattacttcattggacct
ggtttagatcttttgcttcagcatttggctgagaatgatcctaataggcaagggactcct
cctgctcgtaaagaagcggttgaagctttgccaacggttaagataatggaacctttgcaa
tgttctgtttgtttggatgattttgagaaaggaacggaagctaaagagttgccgtgtaaa
cataagtttcatatccgctgtattgtcccgtggcttgagcttcatagttcttgtcctgtg
tgtcgattcgagcttccttctagtgctgatgatgatgatgagacaaagattgattctgag
agaccgccgaggacaagaaatgttggggaaagcaataacagaaacattgttgagaatgtg
ggaaatgcggaaagaggaagacaggatgaggcgaggagcggtaatggaagacggttttcg
tttccatggccattcagtggattattctcgtcttcttcttcgtcttcgtcttcttcatcc
tctggatctcaatctgctgagaacaatttctactcaagatcttccggttcttctcgctga
DBGET
integrated database retrieval system
