Arabidopsis lyrata (lyrate rockcress): 9300535
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Entry
9300535 CDS
T01578
Name
(RefSeq) chaperonin 60 subunit beta 3, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
9300535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9300535
03110 Chaperones and folding catalysts [BR:
aly03110
]
9300535
03029 Mitochondrial biogenesis [BR:
aly03029
]
9300535
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9300535
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
9300535
Messenger RNA biogenesis [BR:
aly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
9300535
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP60 / Chaperonin
9300535
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
9300535
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
9300535
Exosomal proteins of other body fluids (saliva and urine)
9300535
Exosomal proteins of breast cancer cells
9300535
Exosomal proteins of colorectal cancer cells
9300535
Exosomal proteins of bladder cancer cells
9300535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
9300535
NCBI-ProteinID:
XP_020866314
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MASTFSATSSMGSCLAPPSNRLSSFVSISSSSFGKSQTFAQRKARFPKIYAAKQLHFNKD
GTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELDDPVENI
GAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA
ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVV
EGMQFDRGYISPYFVTDSEKMSAEYENCKLFLVDKKITNARDIINILEDAIKGGYPLLII
AEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGATVIREEVGLQLE
KVGPEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQEYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK
ETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYED
LMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGNPMDNSGYGF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacttttagcgcaacgtcttcaatgggttcatgtttggctcctccttcgaat
cgattgtcatcttttgtttcgatctcatcaagctcttttggaaagagtcagacttttgct
cagaggaaagcaaggtttcctaaaatctatgcggctaagcaattgcatttcaataaggac
gggactgcgattaagaagcttcaagctggtgtgaataaacttgcggatttagttggggtt
actttaggtcctaaaggcaggaatgttgttttggagagcaaatacggttcccctagaatc
gtaaatgacggtgttacagtcgctagagaggttgagcttgatgatccagttgagaacatt
ggtgctaagctagtgagacaagctgcttccaagactaatgacttagctggtgatggaact
acgacttctgttgttcttgcgcaaggtctcatcgctgaaggtgtaaaggtggtggctgct
ggtgcaaatccggttttgattaccagaggaatcgagaaaaccaccaaggctcttgttgct
gagttgaagaaaatgtcaaaggaggtcgaagacagtgaacttgcagatgttgcagcggtt
agtgcaggaaacaattacgaagtaggcaatatgattgcggaagcaatggcaaaagttggt
cgtaagggtgttgtcactcttgaggaaggaaaaagcgctgagaacagcctttatgtggta
gaaggaatgcaatttgatcgtggttatatctctccttactttgtcaccgacagtgagaaa
atgtctgcagaatacgagaactgcaagttgtttcttgttgacaaaaaaataacaaatgct
agagacattatcaacattctggaagatgcgattaaaggcggatacccgcttttgatcatt
gctgaagatattgagcaagagccattagcgactcttgttgttaacaagcttcgtggtaca
ataaaagttgctgctttgaaagctcctggatttggagagaggaaaagccagtaccttgat
gacattgctgctcttacaggagctactgtgattagggaagaagttgggcttcagttggag
aaagttggaccagaagttttaggtaatgctggtaaagttgttctcacaaaagacaccacg
acgatagttggtgatggaagtactgaagaagttgtgaagaagagagttgaacagatcaag
aatcttattgaggctgctgaacaagagtatgaaaaggaaaagcttaatgagagaattgct
aaattatcaggcggtgttgctgtaattcaggttggagctcaaactgagacagagcttaag
gagaagaaattgagagttgaagatgctcttaatgctacaaaggctgctgtggaagaaggt
attgttgttggaggaggatgtactctgctaagacttgcatcgaaagtggatgccattaaa
gagactctagcaaacgatgaagaaaaggttggagctgacattgttaagaaagcattgagc
tacccactgaagttaatcgccaagaacgctggtgtaaatggtagcgtcgtcagtgagaag
gttctctctagcgacaacccaaaacacggttacaacgctgcaactggcaaatacgaagat
ctaatggctgcaggaatcattgatccaaccaaagttgtgagatgttgcttagagcatgct
tcatctgtggctaagacattcttgatgtctgattgtgtggttgtggagatcaaggagcct
gaatcagcagctcctgctggtaaccctatggacaattcaggttacggcttctaa
DBGET
integrated database retrieval system
