Arabidopsis lyrata (lyrate rockcress): 9300575
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Entry
9300575 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9300575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9300575
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
9300575
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
9300575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Sulfotransfer_4
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
9300575
NCBI-ProteinID:
XP_020877509
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MEKSCTLLIYYDKGTPAIANEIKEALEGNDVSAKIDALKNAIMLLLNGETLPQLFITIIR
YVLTSEDHTVQKLLLLFLETIEKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
SRLRETEVMEPLIPSVLQNLEHRHPFVRRNAILAIMSIYKLPQGDQLLIDAPETIEKVLA
TEQDPSAKRNAFLMLFNCDQDRAVNYLLTNVDRVSEWNELLQMVVLELIKKVCRTKPSEK
GKYIKIIIALLSAPSSAVTYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKASHREIMVEMIMDVLRALSSPNLDFRRKNFEISLELVTHRNGYEVVQTLKKEV
VKTQSGELEKNGDYRQMLVQAIHACAVKFPEVASAVVHLLMDFLGDTNVASALDVAVFVR
EIIESNPKLRVSIITRLLDTFYQIRAAKVFPFTLWIVGEYCLSLSEVESGIATIKQCLGE
MPFYSASEEAESNDSSNKTPQNTSAIVSSRRPAILSDGTYATQSAASETVFSPSTVAQGS
LASGNLRSLILTGDFFLGAVVACTLTKLVLRLEDVQSSKTEINKVKTQILLIMVCMLQLG
QSHVVPHSIDPDSYERIVLCIKLICHTSDEMKKIWLESCRQSFVKMLSEKQLRELEELKA
KAQISNAQPDDLIDFFHLKSRKGMSLLELEDQVQDDLKRATGEFTKDENDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIVLDVTIINRTKETLQNLCLELATMGDLKLVERPQNYTLAP
ESKKKIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSDSAF
RSMWAEFEWENKVAVNTMIQDEKEFLDHIINSTNMKCLTPTSVLEGECGFLSANLYAKSV
FGEDALVNVSIEKQSDEKLSGYIRIRSKTQGIALSLGDKITLKQKGKSS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcatgtacgctgctaatttactatgacaaaggaactcctgcaattgcgaac
gagatcaaagaagctctagaagggaacgatgtatctgcgaaaatcgatgcgttgaagaac
gcaatcatgcttttgcttaatggtgaaactctgccacagcttttcatcactattatcaga
tatgttttgacgtctgaagaccacacagtccagaagctactgctgcttttcctggagaca
atcgagaaaaccgattctaaagggaaggtgttacctgagatgatattgatatgtcagaat
ctgaggaacaaccttcagcatccgaacgagtacatccgtggagttaccttgcggttcctt
agccgattgagagagactgaagttatggagcctctgattccgtctgtcttgcagaatctg
gagcatcgccatccgtttgtccgtaggaatgcgattttggctattatgtcgatttataag
ctcccacaaggtgaccagctcttgatagatgcacctgaaacgattgagaaagttctggct
accgaacaggatccctctgctaaaagaaacgcgtttcttatgctcttcaattgcgatcaa
gaccgagctgtaaactatcttctgactaatgttgatagggtttctgagtggaatgaattg
cttcagatggtggttctggaattaatcaagaaggtttgtaggaccaaaccatcagagaag
gggaagtatattaagattattatagctttgttaagtgcgccttcatctgcagttacttat
gaatgtgccgggacacttgtttctctatcatctgcgcccaccgctattagagcagctgcc
aacacctactgccagcttcttctttctcagagtgacaacaatgtgaagctaattgtgctt
gataggttgaatgagctcaaagcctctcacagagagatcatggttgagatgatcatggat
gtgctaagagcactctctagcccgaaccttgactttcgcaggaagaactttgaaatttcc
ttggaattggtaactcatcggaatggttatgaggtcgtgcaaacgttgaagaaagaagtt
gtgaagacgcaaagtggagagcttgagaagaatggggattatagacagatgctcgtccaa
gcgattcatgcttgtgcggtcaagttccctgaagtagcaagcgcagtggtacatcttttg
atggatttcttgggtgacaccaacgtggcttcagctcttgatgtggctgtttttgttaga
gagatcatagaatcaaaccccaaattgagggtttcaatcataacccgcttgttggacacc
ttttatcagattcgagctgcaaaggttttcccatttacgctttggattgttggggaatat
tgcctatcactctctgaagttgagtctggcatagcaaccatcaagcaatgcctcggtgag
atgccgttttactcagcttccgaggaagcagagtcaaatgattcctcaaacaagactccg
cagaacacctctgctatagtttcctctagaagacctgccattctttctgatgggacttat
gctacccaaagtgctgcctctgaaaccgtattctctccatctacagttgctcagggatca
ttggcttctggaaacttgagatctcttatactaactggtgattttttcctcggagcagtg
gttgcttgcacattgactaaacttgttctgagattggaggatgtgcagtcatccaaaact
gaaattaacaaggtcaaaacacaaatcttactcatcatggtctgtatgttgcaactagga
caatctcatgtggttcctcattcgattgatcctgattcttatgagaggattgtgctctgc
ataaaattaatttgccacacaagtgacgagatgaagaagatttggctggaatcctgtcgc
cagagttttgtcaaaatgctctctgagaaacagctacgagaactagaggaacttaaagcc
aaagcccaaatatctaacgctcaacctgatgatcttattgatttcttccatctgaagagc
agaaagggtatgagtctacttgagttagaagaccaagtacaagacgacctaaaacgtgca
accggtgaattcaccaaagacgaaaatgatgcaaacaagcttaaccgtattcttcaactt
actggattcagcgacccagtctatgcagaagcatatgtgacagtccatcactatgacata
gtcctcgatgtcacaattatcaaccgtaccaaagaaaccctccagaatctgtgtctggaa
ttggcgaccatgggagatctaaagcttgtcgagcgtcctcagaattacacacttgcacct
gaatcaaagaagaagataaaagccaacatcaaggtttcctccactgagactggggtcatc
ttcgggaacattgtctatgagacttcaaatgtcatggagcgaaacgtcgtggtccttaac
gacatacatattgatatcatggattatatctctcctgctgtgtgttcagattccgcattc
agatccatgtgggcagaattcgaatgggaaaataaggtggctgtaaacactatgattcaa
gacgagaaagagtttcttgatcacattatcaactcaactaacatgaagtgcctcactcca
acatctgtgttagaaggcgagtgtgggtttctctcagctaacttatacgccaagagtgtg
tttggtgaagacgctttggtgaatgtgagtatcgagaaacaaagcgatgaaaagcttagt
ggttacataagaattcgaagcaagacacaagggattgctcttagtcttggagataagata
actcttaagcaaaaagggaaaagtagctga
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