Arabidopsis lyrata (lyrate rockcress): 9300780
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Entry
9300780 CDS
T01578
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9300780
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
9300780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
MMR_HSR1
RsgA_GTPase
AAA_15
AAA_14
AAA_23
AAA_16
AAA_28
ATPase_2
ATP-synt_ab
Zeta_toxin
VapE-like_dom
HypD
Motif
Other DBs
NCBI-GeneID:
9300780
NCBI-ProteinID:
XP_002866394
UniProt:
D7MUD9
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MVSDASKKKAAQKKAAAAAKRGGKAAASSKSAATSSNGVDSLSSGVDALQISDRTCTGVL
CSHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIP
IPDHMDIYHLSHEIEATDMSSLEAVVSCDEERLRLEKEVEILVEQDAGGERLESIYERLE
AMDAATAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTN
HLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYCQTR
SELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVAR
DSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKST
LLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLELPALLYMMREFPGTEEEKMRAA
IGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEAL
NEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMDFKRHLKAKAGLED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgctagcaagaagaaggcagctcaaaagaaagccgccgccgccgctaaa
agaggtggtaaagctgctgcttcttctaaatccgccgctacttcctccaatggagttgat
agcttgtcgagcggtgtcgacgctcttcaaatttctgatcggacttgtaccggagttctc
tgttctcatccccaatctagggatattcgaatagaatctctgtctgtgacgtttcatggt
tatgaccttattgttgattcaatgttggagcttaactatggaaggcgttatggtctgctt
gggttgaatggttgtggaaagtccactcttttaactgcaatcggacgcagagagataccg
attccggatcatatggatatctatcatctttctcacgagattgaagctactgacatgtcc
tcccttgaggctgttgttagctgtgatgaagagaggttgaggttggagaaggaagttgaa
attcttgttgagcaggatgctggtggcgagcgtcttgaatctatctatgagaggttagaa
gccatggatgctgcaaccgctgagaagcgtgctgctgaaattctgtttggacttggtttc
gacaaggaaatgcaagctaagaagacgaaagatttttccggtggttggaggatgagaatt
gcattagcaagagctctcttcataatgccaactatccttttgcttgatgagccgacaaat
catttagatttggaagcttgtgtgtggttagaagagagcctgaagaactttgatcgcatc
cttgttgtggtatcacactcgcaggatttcttgaatggagtttgtacaaacatcatccac
atgcagagcaagcagctcaagtactacactggtaactttgatcagtattgccagactcgt
tctgagctagaagagaatcagatgaaacaatacagatgggagcaggagcagatttctcac
atgaaggagtacattgctaggtttggtcacggttcagccaaacttgctcgtcaagcacag
agtaaggagaaaacattggcaaagatggagagaggtgggctcactgaaaaggttgccaga
gacagcgttctcgttttccgttttgctgatgttgggaagcttccaccgccagtgcttcag
tttgtggaagtgtcttttgggtacacaccggactatctcatatacaaaaacatcgacttt
ggtgtcgacttggactctagggtcgctctcgtgggacctaatggagctggaaagagtaca
cttttgaagctcatgactggtgaactgcacccaactgaaggaatggtgcgacgtcacaac
cacttgaagattgctcagtaccatcagcatctggctgagaagctagacctggaattgcct
gcacttctctacatgatgagggagttcccgggtaccgaagaggagaaaatgagagctgcg
attggtagatttggtcttactggtaaggcccaagtaatgccgatgaagaatctatctgat
ggacaaaggagcagagtgatctttgcgtggttagcttataagcagcctaacatgcttcta
ctggacgagccaactaaccatttggatatcgagacaattgactcactcgctgaggcattg
aacgagtgggatggtggtctggttctggtgagtcacgacttcaggctgatcaaccaagtg
gcgcatgagatatgggtttgtgagaaacaatgcataactaaatggaacggtgacattatg
gacttcaagaggcacctcaaggctaaagccggacttgaagattga
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integrated database retrieval system
