Arabidopsis lyrata (lyrate rockcress): 9300803
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Entry
9300803 CDS
T01578
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00531
Glycosaminoglycan degradation
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
9300803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aly00536
]
9300803
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
9300803
Glycosaminoglycan binding proteins [BR:
aly00536
]
Heparan sulfate / Heparin
Enzymes
9300803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Leu_Phe_trans
DUF6054
Motif
Other DBs
NCBI-GeneID:
9300803
NCBI-ProteinID:
XP_020871206
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MGFKVVFLISLFLLPVTFGSNMERTTLVIDGAHGIAETDENFVCATLDWWPPEKCNYDQC
PWGYASLINLNLSSPLLAKAIQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFEKTDDGL
FGFSKGCLYMKRWDELNRFFHATGAIVTFGLNALHGRDKLNGTAWGGDWDHTNTQDFMNY
TVSKGYAIDSWELGNELSGSGIWASVSVELYGKDLILLKDVINNVYKNSRTKPLVVAPGG
FFEEKWYSELLRLSGPGVLDVLTHHIYNLGPGNDPMLVNRILDPNYLSGISGTFANVNRT
IQEHGPWAAAWVGEAGGAFNSGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGF
YGLLEKETFVPNPDYYSALLWHRLMGKGVLGVQTTASEYLRAYVHCSKRRAGITILLINL
SKNTTFTVAVSNGVNVVLQADTMKRKSFLETLKSKVSWVGNKASDGYLNREEYHLSPKHG
DLHSKIMLLNGNPLVPTATGDIPKLEPARHGVKSPVYINPLSISFIVLPTFDAPACS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggctttaaggttgtgttcttgatttctctgtttctacttcctgttacttttggcagc
aacatggaacgaaccaccttggttatagacggtgcacatggaatcgctgagaccgatgag
aactttgtctgcgcaacgcttgattggtggccacctgaaaaatgtaactatgatcagtgt
ccttggggttacgcttctctcattaatttgaacttatcttctcctcttcttgctaaagct
attcaagcttttaggacgttgaggataagaataggtggttccttgcaagatcaagtgatc
tacgacgtaggagacttgaagactccttgcactcagtttgagaagacagacgatggattg
ttcggattctctaaaggatgtttgtatatgaaacgctgggacgaacttaaccgtttcttt
catgcaaccggagctatcgtgactttcggtttgaacgcgttgcatgggagagataaactc
aacggaactgcgtggggaggagactgggatcataccaacactcaggatttcatgaactac
acagtctcaaagggttatgctatagactcgtgggagttaggtaacgagcttagtggaagc
gggatttgggcaagcgtgagtgtagagctctatgggaaagacttgattctactgaaagat
gtaatcaataacgtttacaagaattctcggaccaagcctttggttgtagctccaggtgga
ttctttgaagaaaaatggtactcggagcttcttcggctctctggacccggtgttcttgat
gtcctgactcatcatatatacaatcttggtccagggaatgatcctatgctagtgaatagg
atactagatccaaattacttgagcggaatttcaggaacatttgccaatgtaaaccgaaca
attcaagaacatggaccttgggctgctgcttgggttggagaagctggtggagcctttaac
agcggtggccgtcaggtttccgagacattcattaacagtttctggtacttagaccagctc
ggtatttcgtcgaagcataacaccaaagtatactgcagacaagctttggttggaggtttc
tacggtctgctcgaaaaggaaacgtttgttcccaatccagattactacagcgcgcttctt
tggcatcgtttgatgggtaaaggcgttctcggcgttcagacaactgcctcggagtatcta
cgagcttacgttcattgctccaaaagaagagcgggtataacgattcttctgatcaatctg
agtaagaacacgacgtttacggtcgcagtcagcaatggcgtgaatgttgttttgcaagca
gatacgatgaagaggaaatcttttctggaaacactcaagagcaaggtttcttgggtcgga
aacaaagcttcggatggatatttgaacagagaagagtatcacttgagtccgaaacacggt
gacttgcatagcaagataatgctcttgaatggtaaccctttggtacccacggccaccgga
gatatcccaaaacttgagccagcccgtcatggtgtgaaatctccggtttatatcaatccg
ctgtcaatctcttttattgtgttgcctaccttcgatgctcctgcttgttcttga
DBGET
integrated database retrieval system