Arabidopsis lyrata (lyrate rockcress): 9300839
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Entry
9300839 CDS
T01578
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9300839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9300839
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9300839
Membrane trafficking [BR:
aly04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
9300839
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
9300839
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
9300839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
PH
Ank_3
BAR
Ank_2
Ank_5
Ank_4
PH_8
PH_11
DUF6444
PH_20
ANK_LRRK2
BAR_2
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
9300839
NCBI-ProteinID:
XP_020871838
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MHFAKLDDSPMFRQQMQSMEESAELLRLRCLRFYKGCRKYTEGLGEGYDADIGFVNALES
FGGGHNDPICVAFGGPVMTKFTIALREIGTYKEVLRSQVEHTLNDRLLQFVNGDVHEVKE
ARKRFDKATITYDQAREKYLSLRKSTRLDVAATIEEDLHSARTTFEQARFHLVSALSNAE
AKKRFEFLEAVSGTMDAHLRFFKQGYELLHQMEPFINQVLAYAHQSRECANYEMASLNER
MQEYQRQVDRETRNSSGSPTGDGMRHNSRNSQKVIEAVMQSAAKGKVQTIRQGYLSKRSS
NLRGDWKRRFFILDSRGMLYYYRKPWNWSSGNGSRSVVHRNMTSENSPGLLSRWLSSHYH
AGVHDEKPVARHTVNLLTSTIKVDADQTDLRFCFRIISPTKVYTLQAENAQDQMDWIEKI
TGVIASLLSFQTPERAIMRLSTVDGGDTFSASDSGSLADPYDIEQAESGESTVEHPMTGG
NRSRFSGCLQQHDMVKTEKPIDVLTRVLGNERCADCGAPEPDWASLNLGVLICIECSGIH
RNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNVYVNSVWEELLNSESRSSSASRSSGTP
KSDRPRKLLVRKPGFNDPISVKELFIHAKYSERIFVRKAIDSQHFQAVFQEIWENVRAND
KKSVYRHIVCSEADVNALRGQASYTVSLPLAKMMQMEAKEETLQAKFKSIEEEFQENPEG
YSNSRGEGESMVREETSNDCSLLHLACLSADIGMVELLLQYGAKINATDSKGRTPLHHCI
ISRRYAIARLLLMRGGDPNAVDKDNNIPVKYASQTDLNDSELIALLTDSKR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgctaagctcgatgattctcccatgtttcgccaacagatgcaatctatggaa
gagagtgcggagttgctgcgattgcgttgcttaaggttctataaaggatgcagaaaatac
acggagggccttggagaaggctatgatgcagatattggctttgtaaatgcacttgaatct
ttcggaggcggccataatgatcctatttgtgttgcttttggaggtcctgtaatgacaaaa
ttcactatcgctctacgagaaatcgggacatacaaggaagttcttcgttcccaggtagaa
cacacgttgaatgaccggttgcttcaatttgtgaatggtgatgtccatgaagttaaggaa
gctcgtaaacggtttgacaaagctaccattacatatgatcaggcacgagagaaatatctt
tcattaaggaagagcacacgactggatgtggctgccacaattgaggaggacctacatagc
gcaagaacgacattcgagcaagcacggttccatctggttagtgcactctctaatgcggag
gctaaaaagagatttgagtttttggaagcagtcagcgggactatggatgctcatctccgt
ttcttcaaacagggatatgaactactacatcaaatggagccttttattaatcaggtgtta
gcttatgcacatcagtctagagaatgtgcaaactatgagatggcatcacttaatgaaagg
atgcaggaataccaaaggcaagttgatcgtgaaactagaaactccagtggttctccaaca
ggggatggcatgagacataactcaagaaactcacagaaagtcatcgaggccgtcatgcaa
tctgctgcaaaaggaaaggttcagactatcagacaagggtatctgtctaaacgttcctca
aacttgagaggtgactggaaaagaagattctttatccttgatagccgtgggatgctatac
tattaccgcaagccatggaattggtcttcaggaaatggaagtcgctctgttgttcatagg
aatatgacttcagaaaacagtcctgggctgctaagtcggtggttgtcttctcattatcat
gctggtgtgcacgatgaaaaaccagttgcacgtcacaccgtcaatctgctgacctcaacg
atcaaagtagatgcagatcagaccgatctaagattctgctttcgaataatttcaccaacg
aaagtttatacattgcaggcagagaacgcacaggatcagatggactggatcgaaaaaata
actggagtaattgcttctttgttgagtttccaaacacctgaaagagcaatcatgcgactg
tctactgtggacggaggtgatactttctctgcaagtgattctggttctttagcagatcct
tatgatatcgaacaggcagaaagtggagaatccacagtggaacatcccatgacaggagga
aaccgttcgaggttttcagggtgcttgcagcaacatgatatggtaaagactgaaaagcca
attgatgtcttgacaagagtgttgggtaatgagagatgtgcagactgtggtgctcctgaa
cctgattgggcctctttgaacctcggtgtccttatttgtattgagtgttctggtatccat
cgtaaccttggtgttcatatttcaaaggtcagatcactcactcttgatgttaaagtatgg
gaaccatcggtgttgacattattccaatcgttaggtaatgtatatgtaaactcagtgtgg
gaggagttgttgaactcggagagtagatcttccagtgctagtagatcttcgggcactccc
aagtcagatcgaccaagaaaattgcttgtaaggaagcctggtttcaatgatcccatttct
gtgaaagagttgtttatccacgcaaagtactcagagaggatttttgtccgcaaagcaata
gacagtcagcattttcaggcagttttccaagagatatgggagaatgtacgtgccaacgac
aagaaatcagtttacaggcacattgtctgctctgaagcagatgtgaatgctctacgtgga
caagcatcatacactgtgtctttgcccttagcaaagatgatgcaaatggaagcgaaggag
gaaacccttcaagcgaaattcaagagcattgaagaggagtttcaagagaatccagaggga
tattctaactcaagaggtgagggggaaagtatggtcagagaggaaacttcaaacgactgt
tctttgcttcaccttgcttgtctttctgcggatatcggtatggtggaactattgcttcaa
tatggggcaaaaataaatgcaacagattcaaaaggtcggactccacttcatcattgtatc
atcagcaggagatatgcaattgcaaggttgctacttatgaggggaggagatccaaatgct
gttgataaagacaataacataccagtcaaatatgcttcacagacagacctcaatgatagc
gaactgattgctttattaacagactccaaaagatga
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integrated database retrieval system
