Arabidopsis lyrata (lyrate rockcress): 9300968 Help Entry 9300968           CDS       T01578                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03040   Spliceosome Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     9300968  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:aly03041]     9300968    03036 Chromosome and associated proteins [BR:aly03036]     9300968 Spliceosome [BR:aly03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     9300968  Complex B     9300968  Complex C    U2 SnRNP specific factors     9300968 Chromosome and associated proteins [BR:aly03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     9300968 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N Motif Other DBs NCBI-GeneID:  9300968 NCBI-ProteinID:  XP_020871152 LinkDB All DBs Position Unknown AA seq 1268 aa AA seqDB search MADLDPEIAKTQEERRKMEADLASLTSINMDRDLYGGNDRDSYVTSIAPNDEEDTNLDTT GSLVAQRLASYTAPRSLLNDVARPHNEDDDVGFKPRQTIAEREGEYRNRRLNRVLSPDRV DAFAMGDKTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAAKHQKDSAPPPPV PSSSKRRHRWDLPEEDGGAAKKAKAASSDWDLPDAAPGIGRWDAPTPGRVSDATPSAGRR NRWDETPTPGRVTDSDATPGGVTPGATPSGVTWDGTPRGLATPTPKRQRSRWDETPATMG SATPMGGVTPGAAYTPGVTPIGGIDMATPTPGQLIFRGAMTPEQLNMQRWEKDIEERNRP LSDEELDAMFPKDGYKVLDPPASYVPIRTPARKLQQTPTPMATPGYVIPEENRGQQYDVP PEVPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPAQRKTALR QLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYKLDELVRPYVHKILVV IEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVAS ALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLSDE NQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLM DAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPEFFKH FWVRKMALERRNYKQLVETTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIDKVVT NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTI KWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGA LKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWM RICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAI AIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDA LMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEG MRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDTLVAAYPVLEDEQNNVYS RPELTMFV NT seq 3807 nt NT seq  +upstreamnt  +downstreamnt atggcggatctagatccagagatcgctaaaactcaagaggaaagacggaagatggaagca gaccttgcttctctcacttctatcaatatggatcgcgatctttacggaggtaacgaccgt gattcctacgtgacttctattgctcctaacgatgaggaggatacgaatctggacaccact ggttctcttgttgctcagcggctcgcgtcttacactgctcctaggtcgcttcttaacgac gtggctcgtcctcacaacgaagatgacgatgtgggatttaaacctaggcagactattgcg gaacgtgagggtgagtataggaataggagactcaatcgggttctttctccggatagagtt gatgcctttgctatgggcgacaagaccccggatgcgagtgttcggacttacacggaccat atgagggagacggctctgcagagggagaaagaggaaactatgaggctcattgctaagaag aagaaagaggaagaagaagctgcaaagcatcagaaggattctgctcctcctcctcctgtt ccttcttcttccaagaggagacacaggtgggatctccctgaagaagacggtggtgctgca aagaaagctaaagcagcaagttcagattgggatttacctgatgcagctccagggattgga cgatgggatgctccaactccagggagagtttctgatgccaccccttctgctggacgaaga aacaggtgggacgaaactcctacacctggtcgtgtgactgattctgatgcaacacctggt ggtgttactcccggtgcaactccttcaggtgttacttgggacgggacgccaagagggctt gccacccctaccccaaagcgtcaacgttcaaggtgggacgaaacaccagccactatgggg agtgctacacctatgggtggagtcactcctggtgcagcttacactcctggtgttacccct attggtgggattgatatggctactccgactccgggtcagcttattttccgtggtgctatg acccccgagcagctcaatatgcaaaggtgggagaaggatatcgaggagagaaacagacca ttgagtgatgaagagcttgatgccatgtttcctaaagatggatacaaggttttggatccg cctgcttcatatgttcccatcagaacccctgcgaggaaacttcaacaaaccccgacaccc atggcaactcctggctatgttattcccgaggaaaaccgtgggcaacagtatgatgtgccc ccagaagttcctggtggtttgccgtttatgaaaccagaggattatcagtattttggagct ctgttgaatgaagagaacgaagaagagctgtctcctgacgagcagaaagaacgcaagatc atgaaactattgttaaaggttaaaaatggaactcctgcccagaggaaaacagccctgagg cagcttactgataaggctcgtgagcttggtgctggtcctttgttcaataaaattttgcca ttgctcatgcaacccactttggaagatcaagagaggcatcttttggtcaaagtgattgat aggattctgtacaaacttgatgagctggtaaggccttacgtccacaaaatccttgttgtt attgagcctttgttgattgatgaggattattatgctcgtgtagaagggagagaaattatt tctaaccttagcaaagcagctggtttggccactatgattgcagctatgcgtcctgatatt gacaacattgatgaatatgtgaggaacacaacagcgagagctttcagtgtggtggcttca gctcttggaatccctgcactcttacctttcctaaaagctgtgtgccagagtaaaaagtca tggcaggcacggcacactggaattaagattgttcagcagattgcgatactaattggttgt gccgtcctgcctcacttaaggtctttagtagagattatcgaacatggtctcagtgatgaa aaccagaaggttaggactattaccgctttgtcactggctgctcttgctgaagctgctgct ccatatggtattgagagctttgattctgttctgaagcctttgtggaaaggtattaggtcg caccgtggtaaagttttagctgctttcttgaaggcgatcggttttatcatccccttgatg gatgctatatatgcgagctactatacaaaagaagtcatggttatcttgattcgtgagttc cagtcgcctgatgaagagatgaagaagatcgtcctcaaggtggtgaaacagtgtgtaagt acagagggtgttgaaccggaatacatacgcagtgatattctgcctgagtttttcaagcat ttctgggttaggaaaatggctctggagaggagaaactataagcagcttgttgaaactact gtggagattgcgaacaaggttggtgttgcagatattgtgggaagagttgttgaagatctc aaggatgagagtgaaccgtatcgacgtatggttatggaaaccattgataaggttgtcaca aacttgggagcatctgatattgatgcgagattggaggaactgctcatagatggcattctt tatgcttttcaagaacagactagtgacgatgctaatgtaatgcttaatggattcggtgct gtagtgaatgctcttggtcagagagtaaagccttatcttccccagatctgtggtaccatc aagtggcgtttgaataacaagagtgctaaggtaagacaacaagctgctgatctgatttct agaattgcggttgttatgaagcaatgcggagaggaacagttgatgggacatcttggtgtt gttttgtatgaatatcttggagaagagtacccagaagtcttgggatcaattcttggagct ttaaaagctatagtcaatgtgattggtatgacgaagatgactcctcctattaaggatctg cttccaaggctgacccctattttgaagaacaggcacgagaaagtgcaagagaattgcatt gatcttgtcggtaggattgctgatcgtggtgccgagtttgttccagcaagagaatggatg agaatctgttttgagcttcttgaaatgcttaaggctcataagaaaggtattcgtcgtgct acagtcaacactttcgggtacatcgccaaagccattggaccacaggatgttcttgccacg ttgctgaacaatctcaaagtccaagaacgtcagaaccgtgtttgcaccacagtcgcaatc gctattgtcgctgaaacatgctctcccttcaccgtattacctgctttgatgaatgagtac cgtgttccagagctaaacgtccaaaacggtgttttgaaatctctttccttcctctttgag tacattggagaaatgggcaaagattacatatacgcagtcacaccgttgcttgaagacgcg ctcatggacagagatttggttcacagacaaaccgcagcttcagccgtgaaacatatggct ctaggtgtagctgggttgggatgcgaagacgctttggttcacttgcttaacttcatttgg cccaacattttcgagacatctcctcacgtcattaacgcggtgatggaagccattgaagga atgcgagtcgcattaggtgcagctgtaattctgaactattgtttgcagggtttgtttcat ccggcgcgcaaggtccgcgaagtgtactggaagatatacaattctctatacattggtgct caggacacgcttgttgctgcttacccggttcttgaagatgagcagaacaatgtgtatagc cgaccagagttgacgatgtttgtgtga

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