Arabidopsis lyrata (lyrate rockcress): 9300973
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Entry
9300973 CDS
T01578
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9300973
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
9300973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
9300973
NCBI-ProteinID:
XP_002864898
UniProt:
D7MRA9
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MERKSFNTEKRSGALDPGSGFGSSKRVKTHHTQLLPPLVVPVGHAAFRLLCPLSHVGAVI
GKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKLGVNNNGNAEGEKKE
EEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCK
ISIRTENLPICADTDDEMVEIEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEF
QASLHRPIETIIQESLPRSIEVNPYDYRLRKDEIFPRGTLARPSDVNPHDTLHHRHIEAV
PQGALRMHIEADRQDALRRHVEADRQDALRRHIEADRQDVLRRHIDVVPRETLYMPSDVV
RGDCFRQHKERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETIPQETLRRQSAD
YLAHRYSILDTHSITTSASIANTASMKPPPSEVEVGNQDVVFKILCSTENAGGVIGSGGK
VVRMLHSETGAFINVGNTLADCEERLIAVTAPENPECQSSPAQKAIMLLFSRLFELSTKK
ILDNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQ
VIQITGEFPNVREAIFHITSRLRDSVFSNSMKNSITKSSSALTTERIYHRQSDNPLSIGS
HQSVSNPPTNSSSLHRRSEDSFLSGSHSSVNYSRPVGTDPYVRPEDPFPDRFNPSAGYSP
NFGRRFTMDHSDISHHLTEVPSRLWASPPPAAPRGLSDASGGLSSARAGHALGSGHKSAI
VTNTTVEIRVPENAMSFVYGEQGYNLEQLRQISGARVIVHEPPLGTSDRIIVISGTPDQT
QAAQNLLHAFILTGETSLSKKYNLN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaaaagctttaatacagagaagagatccggagcactggatccgggttcagga
ttcggatcttcgaagagggtcaaaacacatcacacgcagctgcttccgcctctggttgtg
ccggtgggacacgcggcatttagattgctatgccctttatcgcacgtcggtgcggttatt
ggaaaatctggaaacgttatcaaacagctccaacaatcaaccggagctaagatacgggtc
gaggagcctccgtttgggtctccggatcgggtcatcacgataattgcgcaagcagattcg
aaatcaagggtgaaattgggtgttaataacaatgggaatgctgaaggggagaagaaggag
gaggaagttgaggtatctaaagcacaaggagcgttgattaaggtattcgagcttttagcg
gcggaagcggatagtgatacggtcgtgtgccgattgttgacggagtctagccatgccggt
gctgtgataggcaaaggtggtcaaatggtggggagcattaggaaagaaactggctgcaaa
atttctatacggactgagaatttgccgatttgcgctgatactgatgacgagatggtggag
attgaaggaaatgctattgctgtgaagaaagctcttgtgtctatctcccgctgcttgcaa
aattgtcaatcaattgacaaggtaaggatggtcggaaacagacctctagaaaaagagttc
caagcatctttgcataggccgatagagacaatcattcaggagtctcttcctaggtccatt
gaagttaacccttacgattataggctgaggaaagacgagatctttccccgaggtacttta
gctcggcctagcgatgtgaatcctcatgatactttgcatcataggcatattgaggcggtt
ccccagggtgctttacgcatgcatattgaggcggaccggcaagatgctttacgcaggcat
gttgaggcggaccgacaagatgctttacgcaggcatattgaggcagaccggcaagatgtt
ttacgcaggcatattgatgtggttcctcgagaaacgttatacatgccttccgatgttgtc
aggggagattgttttcgacagcataaagagagggatgattctcatgattccttgcataga
cctttcgagatggttccacgtgatgctatgggcatgccttttgagtcgtttccacgtgat
gcttacggaaggcctattgaaacaatcccacaagaaactcttcgtcggcaaagtgcagat
tatcttgcacatcgttattcgattctagacacacatagcattactacgtctgcttcaata
gctaacactgcctccatgaagccacctccatcagaagtggaagtagggaaccaagatgtg
gtttttaagatactttgttccactgagaatgctggcggagttatcgggagtgggggtaaa
gttgtcaggatgcttcatagcgaaacaggtgccttcataaatgtgggaaatacacttgct
gattgtgaagaacgtctgattgcagtaactgcaccagagaaccctgaatgtcaaagctcg
ccagcccagaaagctattatgcttcttttttctagattatttgagctttccactaaaaaa
atcctagataatggcccaaggacatctatcactgctcggcttgttgtcccaacaagtcag
attggttgtgtgctggggaaaggaggtgttattgtttcagaaatgcggaaaaccactggg
gccacaattcaaattttgaaggttgagcagaacccaaaatgtgtttcagagaatgatcaa
gttatccagattacaggagagttccctaatgtgagagaagccattttccatattacaagc
aggctgcgagacagtgttttctccaactcaatgaaaaattccataaccaagagcagctcc
gccttaactacagagagaatctaccacagacaatcagataatcctctgtctattgggtct
catcaatccgttagtaatccacctaccaactcttcaagtctgcacagaagatctgaggat
tcctttttaagtgggtctcattcatcagttaactattccagacctgttggcacagatcct
tacgtaagaccagaagacccgtttcctgataggtttaatccctctgcaggctattctcct
aattttggtcggcggtttaccatggaccacagtgatatctcccatcacttaactgaggtc
ccatctcgtttgtgggcgtccccgcctccagcagctccaagaggcttatctgatgccagt
ggcggattatcttctgctagggctggccatgcgcttggcagtggacacaaatctgccatc
gttacaaacacaaccgtggaaattagagttccagaaaatgctatgagctttgtgtatgga
gagcagggctacaatctagagcaactgagacagatatcgggtgcgagggtcatagtccat
gaacctcctctaggaacaagtgacaggatcattgtcatatctggaacacctgatcaaacc
caggctgctcaaaacctccttcatgccttcatccttacaggtgaaacctcattgtccaaa
aaatacaacctaaactag
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