Arabidopsis lyrata (lyrate rockcress): 9301186
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Entry
9301186 CDS
T01578
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9301186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9301186
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
9301186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Sec3_C_2
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
9301186
NCBI-ProteinID:
XP_002863329
UniProt:
D7MP28
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MEMESCKLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVA
ERVVLLKHIIDGKIVEAKKAVPRDDHAVFNKSNSSLQGSPGPSTTKKIFVGGLASSVTEA
EFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQKTFHELNGKMVEVKL
AVPKEMALNTMRNQMNVNSFGSSRISTLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRG
GFSPFGHGYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYAASLGRYGSQMETGGASVGNS
SVLNAATKNHLWGNGGLGYMSNSPISRSSFSGNSGTSSLGSIGDNWGTAARGRSSYHGER
GGVGLEAMRGVHVGGYSSGSSSMEADSLYSDSMWLSLPAKAEEGLGMGALDFMSRGPAGY
MNRQPNGGIAA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaatcatgtaagctcttcatcggtggtatatcttgggaaaccagtgaagat
cgtcttcgtgagtattttcacagttttggtgaggttctagaggctgttattatgaaggat
cgtgccactggtcgtgctcgtggctttggtttcgttgtctttgctgatcctattgttgct
gagcgagtcgtcttgcttaaacatatcattgatggtaaaattgttgaggcaaagaaggct
gttccaagagatgatcacgcagtttttaacaaaagtaacagcagccttcagggatcacct
ggcccttcaaccaccaagaagatctttgtgggaggtttggcttcatccgtcacagaggct
gagttcaaaaagtattttgctcagtttggaatgatcactgatgttgtggtgatgtatgac
cacaggacccaacggccgagaggctttgggttcatctcatatgactctgaggacgctgtt
gacaaagtgctgcagaagacattccacgaactcaatggtaagatggtggaggtcaaacta
gctgttcctaaggaaatggctctcaacacaatgcggaaccaaatgaatgtaaatagcttt
ggcagtagtagaatcagtacattgctgaacgagtacacccaaggattcagcccgagtcca
atctctggctatggagtaaaacctgaagttaggtacagtccagcagtaggtaataggggc
ggattctcaccgtttgggcatggatacggaatcgagctgaattttgagccaaaccagact
cagaactacggttctggttccagcggaggctttggacgaccttttagccctgggtatgct
gcgagtctcggcagatacggtagccagatggaaacgggaggagctagtgttgggaacagt
tctgtgctaaatgcagcaacaaagaaccatttatggggaaatggtggtctaggttacatg
tcaaactctccgatatcaagaagcagcttcagtggaaactctggaacgtcttcactaggc
agcattggtgacaactggggaacagctgcacgtggacgtagtagctaccacggtgagaga
ggaggtgtaggattagaagcaatgagaggagttcatgttggtggttacagcagtggctca
agcagcatggaggcagactctctgtacagcgactcaatgtggctttctctgcctgcaaag
gcagaggaaggattgggaatgggagcattggacttcatgtctagaggaccagctggatac
atgaacaggcaaccaaacggaggaattgcagcttag
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