Arabidopsis lyrata (lyrate rockcress): 9301240
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Entry
9301240 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9301240
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9301240
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9301240
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
9301240
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
9301240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
9301240
NCBI-ProteinID:
XP_002863392
UniProt:
D7MQQ1
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAEFSDPPPSNLSSSPKLAKPNQTLDESTPTAPIRDLVTHSLSLSSPIRQIQPSSPANAD
ESSSSPSDKTLTTPPAQISPVSNNNFLQITSTSDSYLYRPPRRYIENSDGQSDDDDLNKI
EPTKPLQLSWWYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIESLRSYMYQNPCN
CGNEKFCVMQALRDHIELALRSSGHGINIDRFRDNLTHFSSDFMINHQEDAHEFLQSFLD
KLERCCLDPKNEPGSILSQDMNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIED
VDNLWSALESFTRVEKLEDQLTCDNCKEKVTKEKQLKFDQLPPVATFHLKRFKNDGVTME
KIFEHVEFPLELDLLPFMSSNQNPEVSTKYHLYAFVEHIGIGATFGHYSTYVRSAPETWH
NFDDSKVTRISEDRVLSRPAYILFYAREGTRWFSSTFEQLKAVFEATPLHFSPNSVLENS
YDSVGNSNKDCNDSGGVSIPDGKWSDFCCHEPKEEVFHSAESNNSEDSSAMIDALESPEA
DESEKPFVETSQQREPESCPAGNKANIDESEKPFAETSQQKEPEPSPAADRASIDAPHVP
LLKVQNQDISPKRKAGERATLGGPKRKVQKTNSHPKRQGSFQIQRAHLKTKNQEETRRTK
RAAYRSNVADSAPDPKYIIHAYSYLNRVQTPRARMLANALAGSPTKKRKISTGPRHMKRS
TIKL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatttagtgacccaccaccttcaaatctctcttcttctcctaaattagctaaa
cccaaccaaaccctagatgagtccacaccaaccgctccaattcgagaccttgttactcac
tcgctctctctttcgtcaccgattcgccagattcaaccttcttctccggcgaacgcagat
gagtcttcctcttctccgtcagataaaaccctaactacaccaccagctcagatttcgcct
gttagcaacaacaattttctccaaatcacgagtacgtcagattcgtatctttatcgtcca
ccaaggagatacatagagaatagtgacggtcaaagcgacgacgatgaccttaataagatc
gagccaacaaaaccacttcagctctcatggtggtatccgagaattgaacccaccggtgtt
ggtgctggattgtataattcaggcaacacttgtttcatagcttctgtgttgcaatgcttc
actcacactgtgcctcttattgagagtcttcgttcatacatgtaccaaaacccttgcaac
tgtggcaatgagaagttctgtgttatgcaagctcttcgagatcatatcgagcttgctctg
aggtcttcaggacatggaataaacattgatagatttcgtgataacctgactcatttttca
tctgattttatgataaaccaccaagaagatgcacacgagtttctacagtcgtttttagat
aagctagagagatgttgtttagatcctaagaatgagcctggctctatcttatctcaagat
atgaacattgttgacaatgtctttggtggcggtctcatgagtacgctttgttgctgcaat
tgcaattctgtttccaacacatttgaaccttctcttggatggagtctggaaattgaagat
gttgataacctctggagtgctctagaatcctttacacgtgtcgaaaaacttgaggaccag
ttaacatgtgataactgtaaggagaaagtcacaaaggagaagcaacttaagttcgatcag
ttgccgccggttgctacattccatcttaagagattcaagaatgatggagttactatggag
aagatcttcgagcatgttgagttccctttggagctggatttgctccctttcatgagcagt
aaccaaaatcctgaggtttccacaaaatatcatctttacgcctttgtggagcatattggg
attggagcaacttttggtcattactccacttatgtgagatcagctcctgagacatggcat
aattttgatgactccaaggtcaccagaatcagcgaagacagagttctatcccgtcctgcg
tatatattattttatgcaagagaaggaactcgttggttttccagtacttttgaacagttg
aaggcagtgtttgaagctactccgttacatttttcaccaaactcagtgcttgaaaacagt
tatgatagtgttggtaattctaacaaagactgcaacgactcggggggagtgtcgatccct
gatggaaagtggtcagatttttgctgtcatgagccaaaagaagaagtgttccattcagcc
gagtctaacaacagtgaagattcttcagccatgattgatgctctcgagtcacctgaggct
gatgaatctgagaaaccttttgttgaaacctctcaacagagagaacctgagtcatgtcca
gctggaaacaaagctaacattgatgaatctgagaagccatttgctgagacctctcaacag
aaagaacctgagccaagtccagctgctgacagagctagcattgatgcccctcatgtccct
ctgctcaaggttcagaatcaagacatatctccaaaacgcaaagctggtgagagagctacg
cttggtggaccgaagcgcaaggttcaaaaaacaaattcccatccgaaacgccaaggaagc
tttcagattcaacgtgcgcatttgaaaactaagaaccaagaggaaactcgtagaacaaag
cgggcggcctatagaagcaatgttgctgattctgctccagatcctaagtacataattcat
gcttattcatatctcaacagggtccagacacctcgcgctcgaatgcttgctaatgctttg
gctggttctccgaccaagaaaaggaaaatctcaacagggcccagacacatgaaaagatca
actattaaactttga
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