Arabidopsis lyrata (lyrate rockcress): 9301278
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Entry
9301278 CDS
T01578
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420
Nucleotide excision repair
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9301278
09124 Replication and repair
03420 Nucleotide excision repair
9301278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9301278
03400 DNA repair and recombination proteins [BR:
aly03400
]
9301278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9301278
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
9301278
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
9301278
TCR (transcription coupled repair) factors
Cul4-CSA complex
9301278
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9301278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ORC5_lid
Motif
Other DBs
NCBI-GeneID:
9301278
NCBI-ProteinID:
XP_002863417
UniProt:
D7MRZ6
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MSLPTKRSTFSAASASDDSSYSSPPMKKAKNDLHHSPQHPNTADKVGFHMEEDPTPAAAN
LSRKKATLPQPTKKLVIKLNKAKPTLPTNFEETTWEKLQSAIRAIFLKKPFSFDLESLYQ
AVDNLCLHKLEGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSLVEKCWQDFCDQMLM
IRSIALTLDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEA
VNRTLLSHLLKMFTALGIYMDSFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLH
EENERCILYIDAVTRKPLIATVERQLLERHILVVLDKGFTTLMDGRRTEDLQRMQTLFSR
VNALESLRQALSSYVRKTGQKIVMDEEKDKDMVQSLLDFKASLDVIWEESFNKNESFGNT
IKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVF
EAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFK
QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLM
WQNSLGHCVLKADFSRGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELRRTL
QSLACGKVRVLQKNPKGRDVEDGDEFEFNDDFAAPLYRIKVNAIQMKETVEENTSTTERV
FQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERE
KSNPQIYNYLA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaccaaacgctctactttctccgccgcttctgcctccgacgactcttct
tactcttctcctccgatgaaaaaggctaaaaacgacctccaccattccccgcaacaccct
aacaccgccgacaaggttggctttcatatggaggaagatccaactcccgccgctgcgaat
ctctctcggaagaaagctacactaccgcaacctactaagaagcttgtaatcaagctcaat
aaagccaaaccaaccttgccaacaaactttgaggagactacatgggagaagttgcagtca
gctatcagagctatatttctcaaaaaaccattttcttttgacctcgagagcctctaccag
gctgttgataacctttgcttgcataagttggaaggaaagctttatgaccagattgagaag
gagtgtgaagaacacatctctgcagctttgcaatctttagttgggcagaacactgatctg
actgttttcttgtcacttgttgagaaatgctggcaagacttttgtgaccagatgctcatg
atccgtagtatagccttgactctggataggaagtatgtgatacaaaatccaaatgtacgt
tcattatgggagatgggtttgcagcttttccggaagcatctttctctggcccctgaagtt
gagcagaggactgttaaaggtctcttaagtatgattgaaaaagaaagattagcagaagct
gttaataggactctactaagccatcttttgaagatgtttactgcactgggaatatatatg
gatagctttgagaaacctttccttgaagggacttctgaattttacgctgctgaaggaatg
aaatacatgcagcagtctgacgttccggagtacctgaagcatgttgagggaaggttgcat
gaagagaatgaaagatgcatactctacatagatgcagtaacaaggaaaccattgatcgca
actgttgaaaggcagcttctcgaacgtcatatacttgttgttcttgataaggggtttaca
acattaatggatggacgtcgtactgaggaccttcagaggatgcaaaccctgttttctagg
gtcaatgcacttgagtctctgaggcaggcgctaagttcatatgttcggaaaactgggcag
aagattgttatggatgaagagaaagataaagacatggtacaatcactattggacttcaag
gcttctcttgacgtaatatgggaagagagctttaataagaacgaatcatttggtaacaca
atcaaagattcatttgagcatctgattaatcttcgtcagaaccggccagctgagcttatt
gccaagtttttggacgagaagctccgtgctgggaataagggtacttctgaagaagaactg
gagagtacacttgaaaaagtcttggttttgttcagatttatccagggtaaagatgtgttc
gaagcattttacaaaaaggatcttgcgaagagactcctgttgggaaagagtgcttcaatt
gatgccgagaaatccatgatatctaagcttaaaactgagtgtggtagccagtttacaaac
aagctcgaagggatgttcaaggatattgaattgtcaaaggaaatcaatgagtcattcaaa
caatcttctcaggccagaaccaaactaccatcgggaattgagatgagtgtccacgtgtta
acaacaggttactggccaacatatccacctatggatgttaagcttcctcatgaactaaat
gtctatcaggatatcttcaaagagttctatttaagcaagtacagtggtaggaggttaatg
tggcaaaactcattaggccactgtgttttaaaggcagatttctccagaggtaaaaaggag
ctggctgtttccctgtttcaggctgttgtgttgatgttatttaacgatgcaatgaaactt
agctttgaagacattaaagattccaccagcatagaggacaaagagctgaggaggacgttg
cagtcgcttgcttgtgggaaagttcgtgtcctgcagaagaatccaaagggaagagatgta
gaagatggtgatgaatttgagtttaatgacgactttgcagctccgctatatcgcattaag
gtaaatgcaatccagatgaaagagacagtggaggagaacacaagtacaacggaaagagta
ttccaggaccgacaataccagatcgatgcagccattgttcgtattatgaagacaagaaaa
gtcttaagccatactcttctaatcactgagctcttccaacagctgaaattcccgataaag
cctgctgatctgaagaagaggattgaaagcttgatcgatcgagaatatttggagagggaa
aaaagcaaccctcagatatacaattatcttgcttag
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integrated database retrieval system
