Arabidopsis lyrata (lyrate rockcress): 9301293
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Entry
9301293 CDS
T01578
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
9301293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9301293
04121 Ubiquitin system [BR:
aly04121
]
9301293
03029 Mitochondrial biogenesis [BR:
aly03029
]
9301293
Membrane trafficking [BR:
aly04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
9301293
Atg8 conjugation proteins
9301293
Ubiquitin system [BR:
aly04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
9301293
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
9301293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
9301293
NCBI-ProteinID:
XP_002865219
UniProt:
D7MSQ2
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MAEKETPPIILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFSGPCSHPQVSNH
LTLLSESLPLDEESLIGSTSHGNRNKCPVPGILYNTNTVESFNKLDKQSLLKAEAKKIWE
DIQSGKALEDSSVLSRFLVISFADLKKWSFRYWFAFPALVLDPPVSLIELKPASEYFSSE
EAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDWEACQGDHQKLLFGFYDPC
HLPSNPGWPLRNYLALIRSRWNLETVWFFCYRESRGFADLNLSLVGQASVTLSSGESAET
VPNSVGWELNKGKRVPRSISLANSMDPTRLAVSAVDLNLKLMRWRALPSLNLNVLSSVKC
LLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYTFEDCVGRGEFKAVAAV
KSLKQIFPAMETSGVVMAIPMPGHPISSQEEDSVLGDCKRLSDLIESHDAVFLLTDTRES
RWLPSLLCANANKIAINAALGFDSYMVMRHGAGPTSLSDDMQNLDINKTNTQRLGCYFCN
DVVAPQDSMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQHPLGINAKGDNSSLSNTG
NNDDSPLGILPHQIRGSVSQFSQITLLGQASNSCTACSETVISEYRKRGNSFILEAINHP
TYLEDLTGLTELKKAANSFNLDWEDDDTDDDDVAVDL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaggaaactccaccaatcatacttcaattcgctccattgaacagttccgtc
gacgaaggtttctggcatagcttctcctccttgaaactcgacaaactcggaatcgatgat
tctccgatttcaatcaccggtttctctggaccatgttcacatccacaagtctcaaatcat
ttgactcttttatcagagtcattgcctttagatgaagaatcattgattgggagtactagc
catggaaataggaataagtgtcctgttcctgggattttgtataacaccaataccgtcgaa
agctttaataaacttgacaaacaaagtctgttaaaagcagaagcaaagaagatttgggag
gatatacaatcaggaaaagctcttgaggactcttctgtgttatcaagattccttgttatc
tcttttgcagaccttaagaaatggagttttcgttattggtttgcgttccctgcacttgta
cttgatcctcctgtaagtttgatagaattaaagccagcttcagagtattttagttctgaa
gaggcggaatcagtatccgctgcttgtaatgattggcgcgactcagatttaactactgat
gttccattctttttggtttcggtttcttctgattcaaaagctagtatcagacatcttaaa
gactgggaagcgtgccaaggtgatcatcaaaagttgctattcggtttctatgacccatgt
caccttcctagtaatcctggctggccacttcgaaattatttggcactgattcgctcaaga
tggaaccttgagacagtttggttcttctgctacagagagagtcgtggtttcgctgacttg
aacctttcccttgttggtcaagcctcagttacactttcatcaggtgaatcagctgagact
gtacctaactcagtgggatgggagcttaacaaagggaaacgtgtaccccgatccattagc
cttgctaattccatggatccaacaaggttggctgtttctgctgttgatttaaacttaaag
ttaatgagatggcgagcattaccgtctcttaacttaaacgttttgtcctctgtcaaatgc
cttcttcttggagctggtacattgggttgccaagtggctcgtacccttatgggttgggga
atccgcaatatcacctttgttgactatggcaaagtagctatgtctaatccagtcaggcaa
tctctctacacgtttgaagattgtgtaggccgaggcgagtttaaagctgttgctgctgtt
aaaagccttaaacagatatttccagcaatggaaactagtggagttgttatggctataccg
atgcccggacatccgatttctagccaagaagaagattctgttctcggtgattgtaaacgc
cttagcgatctgattgaatctcatgatgccgtgttcttgttaaccgatacaagagaaagc
cggtggttaccttctcttctttgtgctaatgccaataagatcgctataaacgcggcttta
ggttttgacagctacatggtaatgcgccatggcgctggccccacttccctgtctgatgat
atgcagaatcttgacataaacaagacaaatacacagagacttggttgttacttctgcaac
gacgtggttgcacctcaggattcaatgactgatcgaactctagaccaacaatgtactgtt
acacgcccgggtctagctcctattgcaggagctctcgccgttgaactcttagtcggagtc
ctacagcacccacttggtatcaatgcaaaaggcgacaattcgagcttgagtaatacagga
aacaatgatgattcgcctctcgggatattacctcatcagattcgaggctcagtttctcag
ttctcacagatcacactgcttgggcaagcttccaacagctgtaccgcttgctctgaaacc
gtgatatcggagtatcggaagagaggaaacagtttcatacttgaagctattaaccatcct
acatacctggaggatcttaccggcttaaccgagctaaagaaagctgctaattcatttaac
ctcgactgggaagacgatgatactgatgatgacgatgtagctgtagatctttaa
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