KEGG   Arabidopsis lyrata (lyrate rockcress): 9301349
Entry
9301349           CDS       T01578                                 
Name
(RefSeq) cyclin-T1-5 isoform X1
  KO
K15188  cyclin T
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9301349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aly03021]
    9301349
Transcription machinery [BR:aly03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     9301349
    Brd4/P-TEFb complex
     9301349
    7SK RNP complex
     9301349
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C Cyclin_C_2 RM44_endonuclase
Other DBs
NCBI-GeneID: 9301349
NCBI-ProteinID: XP_020877464
LinkDB
Position
Unknown
AA seq 577 aa
MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETP
RPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVHHPYK
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
GEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAQRPGSRNAVST
DEHVGSRQTSVRSTHENSNSDNHSSKGVLNQNNENGAGEAANVSVDHKEEIERETKESSL
HPESHPPHKDNVREAPHNSRPLVEGPAKDNSEREGGEIQDDGAVHKSRNVDVGDAPISQS
PKDLKLLRDKVKAKREKAKKLLGERTRKKDLMDEDDLIERELEDVELAVEDEKTKERKVE
NRPKTENSDLMGTEHGEILDVKGEVKNTEEGEMVNDVSPMMHSRKRKMGSPPEKQSEGKR
RHNSENGEEGHHNKTSRGSSHHGDREHRRHSQENNHS
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggctggagtactagctggggaatgttcttacagtgagagtggagtttcatcacactca
aggaattctcatgaaaagcaagaagaggtttcccgctggtatttcggaagaaaagaaata
gaagagaattcaccgtcaaggttagatggtattgacttaaagaaggaaacgtacctccgc
aaatcctactgtacgtttttgcaggacttgggcatgagattgaaagttccccaggttaca
atagctacagcgataatcttctgtcatcgattcttctttcgccaatcacatgcaaagaat
gacagaaggactattgcaactgtatgcatgttccttgctggaaaggttgaggaaacccca
cggcccttgaaagatgttatttttgtctcctatgagataataaacaagaaggatcctggt
gcttcacagaaaatcaagcaaaaggaagtatatgagcaacaaaaagagcttatattaaac
ggagaaaaaattgttctttctactttaggctttgacctcaatgttcatcatccttataaa
ccccttgtagaagctataaagaaatttaaggttgcacagaatgctctcgcccaagttgca
tggaattttgttaatgatggtcttcggacatctctctgcctgcaatttaagcctcatcat
attgcggctggtgcaatatttcttgcggccaagttccttaaagtgaagttaccatcagat
ggggagaaggtttggtggcaagaatttgacgtcacaccccgacaattggaggatgttagc
aaccaaatgcttgagctttatgagcaaaaccgtgtccctgcatctcaagtaagcgaagtc
gaaagtagtgtaggtggagggtcagctcagcggccaggctccagaaatgcagtttcaacc
gatgagcatgttggttctaggcaaacatcagtacgttcaacccatgaaaattcaaattct
gataatcattcatcgaaaggagtattgaatcagaataatgaaaatggggctggtgaggca
gctaatgtcagtgtcgatcacaaagaggagatagagagagaaacaaaagaaagcagccta
catcctgaaagtcatccaccccataaggacaatgtaagagaagccccccataactctaga
cctttagttgagggacctgcgaaagacaactcagaaagagagggtggagagattcaagat
gatggtgctgttcataaatctagaaatgttgatgtgggtgatgccccaatcagccaatcg
ccaaaagacttaaaattgcttcgagataaggtgaaggctaaacgagagaaagctaaaaag
ttactaggtgaaaggacgaggaaaaaggatttgatggatgaggatgatttgattgaaaga
gaattggaagatgtggaactagctgttgaggatgaaaagacgaaggaaaggaaagtagag
aacaggccaaaaaccgagaactctgatctcatgggtacagaacatggtgagattctagat
gttaaaggagaagtcaaaaatacagaggaaggcgaaatggtaaacgatgtgtccccgatg
atgcatagcagaaagagaaaaatgggaagccctcctgaaaagcagtcagaaggaaagaga
cgccacaatagtgagaatggtgaagaaggccaccacaacaaaacgagcagaggtagtagt
catcatggtgatagagagcacagaagacactcacaagagaataaccattcataa

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