Arabidopsis lyrata (lyrate rockcress): 9301452
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Entry
9301452 CDS
T01578
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
aly03015
mRNA surveillance pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9301452
09122 Translation
03013 Nucleocytoplasmic transport
9301452
03015 mRNA surveillance pathway
9301452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9301452
03041 Spliceosome [BR:
aly03041
]
9301452
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
9301452
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
Cap binding complex
9301452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
9301452
NCBI-ProteinID:
XP_020871801
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPSNYGNGR
RGGGNYGQGGPNRHGRGGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDHDMRPEKNPRF
RESGDSDDDGEDDRKRRS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggagcaagcgaagctctcggcttatcgagatagaagattttct
ggaacacaagaggagtttgatgaggcgttaagggcatctacaacggtttacattggcaat
gtgtctttctacactactgaagaacagctttacgagcttttctctagagcaggagaaatc
aaaaagatcatcatgggtttggataagaacactaaaacaccttgtggcttttgtttcgtc
ttgttctactcgagagaggatactgaagatgcagtcaagtatataagtgggactattctg
gatgatcggcctattcgtgtggattttgattgggggttccaagaaggaagacaatgggga
cgtggtagaagcggtggccaggttcgagatgaataccgtacagattacgatcctgctaga
ggtggttatggaaaattagttcagaaggaacttgaagcacaaaggcagctcgtggattac
ggtactggctcattgggagcctatcctcaagctgcgccatcaaattatggaaatggaagg
cgtggtggtggaaactatggtcaaggaggaccaaatcgccatggaagaggaggagactat
catcggaaacgacaaagagacgacgatcgctatggccgtgataactcaagaagaaacaca
gatcatgagtctaggagagacactgatcatgatatgagaccggagaagaacccacgtttc
cgtgagagcggtgactccgatgatgatggtgaagatgatcggaagagaagatcttaa
DBGET
integrated database retrieval system
