Arabidopsis lyrata (lyrate rockcress): 9301455
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Entry
9301455 CDS
T01578
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9301455
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9301455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-met
zf-C2H2_jaz
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
9301455
NCBI-ProteinID:
XP_002865381
UniProt:
D7MN23
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MTSEVLQTISSGSGFAQSSSTLDHDESLINPPLVKKKRNLPGNPDPEAEVIALSPKTLMA
TNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRA
LGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDS
FITHRAFCDALAEETAKINAVSHLNGLAAAGAAGSVNLNYQYLMGTFIPPLQPFVPQPQT
NQNHHHQHFQPPPPSSLSLWMGQDIAPPQPQPQDYDWVFGNAKAASACIDNNNTHDEHIT
QNANASLTTTTTLSVPSLFSNDQPQNANANSNVNMSATALLQKAAEIGVTSTTTAATNDQ
STFLQSFPLKSSDQTTTYDGGEKFFALFGSNNNIGLMSHSHNHQEIENPRNDVTVESALD
ELQNYPWKRRRVDGGGGAGGGQTRDFLGVGVQTLCHPSSINGWI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgaagttcttcaaacaatctctagtggatcaggttttgctcagagctcatca
actctagatcatgatgaatctctcatcaatcctcctcttgttaagaagaagagaaatctc
ccaggaaatcctgatccggaagctgaagtgatagctctatcccccaagaccctgatggct
acaaaccggttcctatgcgagatctgtggcaaaggtttccaaagagaccaaaacttacag
cttcatcggcgaggacacaatcttccatggaagttgaagcagaggacaagcaaagaagtg
agaaaacgtgtctacgtttgccccgagaagacatgcgtccaccatcactcctctagagct
ctaggcgatctcaccggaatcaaaaagcatttctgccggaaacacggcgagaagaagtgg
aagtgcgagaaatgtgccaagagatacgcagtccaatctgattggaaagctcattccaag
acttgtggtactagagagtaccgttgcgactgtggcaccattttttcaaggcgagacagc
ttcatcactcatagagctttttgcgatgccttagcggaagaaaccgctaagataaacgca
gtgtctcatctcaacggtttagccgcggctggagcagcaggatcagttaatctcaactat
caatatctcatgggaacattcattccaccgcttcaaccatttgtaccgcaaccgcaaaca
aatcaaaaccatcatcatcaacattttcagccaccacctccgtcgtcgctttccctatgg
atgggacaagatatcgcgccgcctcaaccgcaaccgcaagactacgactgggttttcgga
aacgctaaggcagcgtctgcatgcattgataataataatactcacgatgagcacattacg
caaaacgcaaacgcaagtttgaccactactactactctctctgtcccttctttattcagc
aatgaccaaccacaaaacgcaaacgcaaactcaaacgtgaatatgtccgcaacagcgtta
ctacagaaagctgctgaaattggcgttacttctacaacgacggcggcgactaacgaccag
tcaacgtttcttcaaagtttcccgcttaaatcctccgatcaaaccaccacttatgacggt
ggcgaaaagttctttgctttgttcgggtctaacaacaacattgggttaatgagtcatagt
cataatcatcaggagattgagaaccctagaaatgacgttacagttgagtctgcgttggat
gaattacagaattacccttggaaacgtagaagagttgatggtggaggaggagctggagga
gggcaaactcgggatttcctcggggtcggtgtacaaacgttgtgccatccatcgtctatc
aatggatggatttga
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