Arabidopsis lyrata (lyrate rockcress): 9301475
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Entry
9301475 CDS
T01578
Name
(RefSeq) protein argonaute 10
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9301475
03036 Chromosome and associated proteins [BR:
aly03036
]
9301475
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9301475
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9301475
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9301475
microRNA pathway
RISC loading complex
9301475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
E1_UFD
Clr5
Motif
Other DBs
NCBI-GeneID:
9301475
NCBI-ProteinID:
XP_002865401
UniProt:
D7MNL0
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MPIRQMKDSSETHLVIKTQPLKNHNPKTVQNGKIPPSPVTTPATVTQSQASSPSPPSKNR
SRRRNRGGRKSDQGDVCMRPSSRPRKPPPPCQTTSAVVSASTAGEIVAVSHQMQMGVRKN
SNFAPRPGFGTLGTKCIVKANHFLADLPTKDLNQYDVTITPEVSSKSVNRAIIAELVRLY
KESDLGKRLPAYDGRKSLYTAGELPFTWKEFTVKIVDEDDGIINGPKRERSYKVAIKFVA
RANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVKRFCPVGRSFFSPDIRTPQRLGEGL
ESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSKPLSDSDRVKIK
KGLRGVKVEVTHRANVRRKYRVAGLTTQPTRELMFPVDENCTMKSVIEYFQEMYGFTIQH
THLPCLQVGNQKKASYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRT
VQHNAYDQDPYAKEFGMNISEKLASVEARILPAPWLKYHENGKEKDCLPQVGQWNMMNKK
MINGMTVSRWACVNFSRSVQENVARAFCNELGQMCEVSGMEFNPEPVIPIYNARPDQVEK
ALKHVYHTAMNKTKGRELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKIS
KQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAA
VVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQ
KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANN
HRDKSSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD
GIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPEIMQDNGSPGKKNTKTTT
VGDSGVKPLPALKENVKRVMFYC
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaggcaaatgaaagatagctctgagactcatttagtcatcaaaacccaacct
ttaaagaaccataatcctaaaaccgtccaaaacggcaaaatccctccttctccggtgact
actccggcgacggtgactcagagtcaagcttcttcaccttcaccaccgtcaaagaatcgt
agccggaggagaaatcgtggtgggagaaaatctgatcaaggagatgtttgtatgagacct
agctctcgtcctcgtaaaccaccaccgccgtgtcaaaccacttccgccgtcgtctcagcc
tccaccgccggtgagattgttgccgtgagtcatcagatgcagatgggtgttcgtaaaaac
tcaaactttgcgccaagacctggatttggaacacttggaactaaatgcatcgttaaagct
aatcatttcctcgctgatttgcctaccaaggatttgaatcaatatgatgttacaataact
cctgaagtgtcatcaaagagtgtaaacagagctataattgctgagttagttagactttac
aaagagtctgatctcgggaagagacttccggcttacgatggccggaaaagtctttacact
gccggagaacttccttttacttggaaggagttcactgttaagattgttgatgaagatgac
ggtatcatcaatggacctaaaagggagagatcatataaggtggctattaagtttgttgca
cgggcaaatatgcatcacttaggcgagtttctagctggtaaacgggcagattgtccgcaa
gaggcggtgcagattcttgacattgtactcagggaattgtcggttaagaggttttgtccg
gttggaagatctttcttttcgcctgatattagaacaccgcagcgactcggtgaagggtta
gagtcatggtgtgggttttaccagagtattagaccaactcaaatgggtttatcactaaat
atcgatatggcttcagctgcgttcatcgagcctcttccggtaatagagtttgtagcacag
cttcttggaaaggatgtcttgtcgaagccattgtctgattctgatcgggttaagattaag
aagggtctcagaggagtgaaagtagaggttactcacagagcgaatgtaaggaggaaatac
cgtgttgcgggtttaacaactcaacctacaagagagctaatgtttccagttgatgagaac
tgtacgatgaagtcggttattgagtacttccaagagatgtatggattcacgatccagcac
acgcatttgccgtgtctccaagttggaaaccaaaagaaagcaagctatttgccaatggag
gcctgcaaaattgttgagggacaacgatacacgaaaaggttgaatgagaagcagattact
gctctcttgaaagttacatgtcaaaggccaagggacagagaaaacgatattttgcggacg
gtccaacacaacgcatatgatcaagatccatatgcgaaggagtttggcatgaacataagc
gaaaagttagcttctgttgaagctcggattcttccagctccatggcttaagtatcacgag
aacgggaaagaaaaagattgtctcccgcaagtcggtcagtggaatatgatgaacaagaaa
atgatcaatgggatgacggtgagcagatgggcctgtgttaacttctcacgcagcgttcaa
gaaaacgttgctcgtgcattttgtaatgaacttggtcagatgtgtgaagtctcgggcatg
gagttcaatccagaacccgtgatcccaatatataatgcgaggcccgatcaagtcgagaaa
gctctaaagcatgtttatcacactgcaatgaacaaaaccaaaggcagagagttagagctt
ctgttggcaattttacctgataacaacggttcactttatggtgatcttaagagaatctgc
gaaaccgagcttggtttgatatctcaatgttgtctcacaaaacatgtgttcaagattagc
aaacagtatctggcaaatgtatcccttaaaatcaatgtcaagatgggaggaaggaacaca
gttcttttagacgccataagctgtagaattccactggttagcgatataccgacaattata
tttggcgcagacgtgactcacccagagaacggggaagagtcaagcccttcaatcgctgct
gttgttgcttctcaagactggcctgaagtcacaaaatatgcgggtttagtttgtgctcaa
gctcacaggcaagaacttatacaagatttgtataaaacatggcaagatcctgtacgcggt
actgttagtggcggtatgatcagggaccttctgatctcatttaggaaagcaacagggcag
aaaccgcttcgaattatcttttaccgtgatggagtaagcgaagggcaattctatcaagtt
ttactctatgagttggatgcaattcgaaaggcttgtgcgtcgcttgaaccgaattatcag
ccaccggtgacattcattgttgtacagaagcgtcaccacactcgtttgtttgctaataat
caccgagacaaaagcagtactgaccgaagcggaaatatcttacctggtactgtagttgac
accaaaatatgtcatccaactgaattcgacttctacctttgtagccatgcgggtattcag
ggaacaagcaggcctgcacattaccatgttctttgggacgagaacaatttcacagctgat
ggtattcaatctttgactaataatctctgttatacctatgcacgatgcactcgatcagtc
tcgatagttcctccagcgtattatgcgcatcttgcagcatttcgagcacgtttctacatg
gaaccggagataatgcaagacaacggatcacccggaaaaaagaacacgaaaactacaact
gtgggagactcaggtgtgaagcctttaccggctttgaaggagaatgttaagagagtaatg
ttctactgctaa
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integrated database retrieval system
