Arabidopsis lyrata (lyrate rockcress): 9301477
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Entry
9301477 CDS
T01578
Name
(RefSeq) 3-ketoacyl-CoA synthase 20
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00062
Fatty acid elongation
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly04626
Plant-pathogen interaction
Module
aly_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
9301477
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9301477
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
9301477
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
9301477
NCBI-ProteinID:
XP_020871032
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
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MSHNQNQTHRPVPVHVTNAEPNPNPNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLL
AATIANLSSFTINDLSLLYNILRFHFLSATLATGLLISLSTAYFTTRPRRVFLLDFSCYK
PDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEE
ARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSY
NLGGMGCSAGLISIDLAKQMLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGG
AAVLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNNAEETGKIGVSLSKNLM
AIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHA
GGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQI
AFGSGFKCNSAVWKALRTIDPMDEKTNPWIDEIDDFPVQVPRITPITSS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaccaaaaccaaactcaccggccagtcccggtccatgtcacaaacgccgag
ccaaaccctaacccaaacaacctcccaaactttctcttatccgttcgtctcaaatacgta
aaactcggttaccattacctaatctccaacgctctctacatcctcctcctccctctcctc
gccgcaacaatcgctaacctctcttctttcaccatcaacgacctctctctcctctacaac
atactccgtttccatttcctctccgccacactagccaccggactcttaatctctctctcc
accgcttacttcaccacccgtcctcgccgtgtcttcctcctcgacttctcatgttacaaa
cctgacccttcactgatctgcactcgagaaacattcatggacagatctcaacgtgtaggt
atcttcacagaagacaacctagctttccaacaaaagatccttgaaagatcgggtctaggt
caaaaaacttacttccctgaagcccttcttcgtgtccctcctaatccttgtatggaagaa
gcgagaaaggaggcagagacagttatgttcggagctattgacgcggttcttgagaagacc
ggtgttaaacctaaagatattggaatccttgtggtgaattgtagtttgtttaatccaacg
ccgtcactttctgctatgattgtgaataagtataagcttagaggaaacattttgagctat
aatcttggtggaatgggatgtagtgctggactaatctccattgatctcgctaaacaaatg
cttcaggtgcaaccaaactcctacgcactagtggtgagcacagagaacataaccctaaac
tggtacttaggtaacgaccgatcaatgcttctctctaactgcatcttccgtatgggcggc
gccgcggtacttctatcgaaccgctcctcggatcgtagccgttcaaaatatcagctaatc
cacaccgttcgtacccacaaaggagctgatgacaacgcatttggctgcgtttaccaacga
gaagacaacaacgcagaagaaaccggcaaaatcggagtatcactctctaaaaacctaatg
gcaatagctggagaagctctcaagacaaacatcacaactctcggaccactagtcctacca
atgtccgaacaacttctctttttcgcgaccctcgtggcccgaaaagtcttcaaagtcaag
aaaataaagccttacattcccgatttcaagctagctttcgagcatttctgtatccacgcg
ggaggtagagccgtgctcgacgagatagagaagaacttggatttatccgaatggcacatg
gagccatcgaggatgacgttgaaccggtttggaaacacttcgagtagctcactttggtat
gagcttgcgtatagtgaagctaaaggaaggattaagagaggagataggacttggcagatt
gcgttcggatcgggttttaagtgtaacagtgcggtttggaaagctttgagaacgattgat
ccaatggacgagaagactaatccatggattgatgagattgatgactttcctgttcaagtt
cctaggatcactcccattacgtcgtcgtag
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