Arabidopsis lyrata (lyrate rockcress): 9301646
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Entry
9301646 CDS
T01578
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-1
KO
K03265
peptide chain release factor subunit 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9301646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9301646
03012 Translation factors [BR:
aly03012
]
9301646
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
9301646
Translation factors [BR:
aly03012
]
Eukaryotic type
Release factors
9301646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
9301646
NCBI-ProteinID:
XP_020889956
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MGDKNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEEGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLGAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNNATGETVIKHLNKEQEANTENFKV
IDSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
TAFDSEDGDFVDDDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaaaacgatgacgacaagaacattgagatatggaagattaaaaagctgatc
aaatcccttgaagctgctaggggtaatggaactagcatgatctctctcatcatgcctcca
cgtgatcaggtctctcgtgttactaagatgttgggtgatgagtatggaaccgcgtcaaac
atcaagagcagagtcaatcgccagtctgttttgggtgccattacttctgctcagcaaagg
ctgaaactttacaacagggtccctcctaatggtcttgtgctctataccggaacaattgtt
aatgaggaaggtaaggagaagaaggttactattgactttgagcctttcagacccatcaat
gcttctctctacctctgtgacaacaagtttcatacggaagctttgaatgaattgctggag
tcagatgataagtttggtttcattgtaatggatggaaacgggactctctttggaactctg
agtggtaatactcgtgaggtgcttcacaagttctctgttgatcttccgaagaaacacgga
agaggaggacagtctgctcttcgttttgcccgtctccgtatggagaagcgtcacaattat
gtgaggaagaccgctgagctcgccacgcagtactacatcaatcctgcaacaagtcagccg
aatgtgtctgggctaatacttgccggttcagcagatttcaagactgagttgagtcagtca
gatatgtttgatccccggctgggtgcgaagatactgaatgtcgtggatgtatcgtatgga
ggagaaaatggtttcaatcaggctattgagctgtcagctgaaattctggcgaatgtgaag
ttcatccaagagaagcgtctgattgggaagtactttgaggagataagccaggacacaggg
aagtatgtgtttggtgtggaagatacattgaatgctttggagtcaggtgctattgagacg
ctgattgtatgggaaaatctcgatatcaacagatatgtgatgaagaacaatgcgactgga
gaaactgtgatcaagcacctgaacaaggaacaggaagccaacacggagaatttcaaagta
atcgacagcgacttggctttggatgtggaggagaagctgtcgttactggagtggctggcg
aatgagtacaggcgttttggttgtgcgctagagtttgtgacgaacaaatcacaggaaggt
tctcagttttgcagagggtttggaggaatcggaggaatacttcgttaccagcttgacatg
actgcctttgattccgaggatggagattttgttgatgatgattcggaataa
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