Arabidopsis lyrata (lyrate rockcress): 9301784
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Entry
9301784 CDS
T01578
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
9301784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9301784
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
9301784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
9301784
NCBI-ProteinID:
XP_020871316
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MTVVAAAEEPTQRPFTDNDVIRLAQYHHCQTGFSLPPYLLSPSSHDSLLSYLKSRSSSPS
PSKPVSEYVIALLSLISLSPTTPSLSSLLASLLISYTQIFNSGKIPSDSDSLKTIQLFGT
LLRHLHVKEVKFVVDSILLGVSRVITVDEAQLFDLLPVCFDLLRNSREAKASEIDFVDSA
IDRVLSCEWSKGLLTKMVSLAKEFSFLDKGRKSELVEKVFLGIKLIDLQDLPSLVYQLLV
LASKGFCKREVIGGVVGFFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGLEVVALV
KSDLRAFNHFTVAVLFSVARVRKFGENSLGILRTALLNAYNDYRLSKDCKWLPDELKEDS
FLHAKLVEKSLLRAVSECRYGREHVVPSVIQFGFMLLESVEESRSNEFGDSNGVLGIEKL
SIQILGTLFEVHDMTRNEIIEQCKFRILSLKCAKSKPIVRLLRYLVQRYSLIMLEFVHHL
KELLGYFTFMEGNISCLLVSAVIPLIKFSHDLQDYTILVIRKAMFRREYTVRVAATKVIT
DLILAEKQAKRDGSFTLQDSSSQASSSQQTEMSCIVRGNLFTELNGLLQRCLYQQALVKE
VVYDGLVKLVLIDPSTGGHVLDFLMPHFLRFFRQDTDFQLGIISCIKLEGGKYIIEEPLD
RLLFCISWILLLQVHNSSDRPSDAAWPCFGFSLSQDNEQQGGRNISHEVYSNALVKIRNF
LLGKNLEDIVGQSQDTVSASLEDDKRKSYCLIILGIIQVQLNYIIVDLEKQPEGKKGAVR
KEIVDLIDLYESLEKDVGKLKPSNIGKRVRFSTCNDTDAGNTSISEEREKVPFLATSSIY
QLFLLSFKLYSSKSVGTLSGSQDHSQSSPAKTEKSISKIFSFTLQVCVGHIRSSLCMKEE
NPLKPLVCGDMKVLGPPLLKVLYLLKPDPPLATGQTKKDSKGKKDAEGRKQCLHLALLSL
KELLNIYSSGSGLTGLLEDLLAVPASEDATLEECREASRIEDPLVKGIEIFMEKIMKPMI
TDFIAQNSNDVEILCAIMLKLGNNLPDKSKQRHGSWAHQMCRSCETSNTTVAKSIVKLAI
SFTTSPGDLCIAVEVAKELQNIMGLDKSDTLEVSESYMVINQSTSASVTSCILQSTDSAI
VEMDWATKKLKNFYVVSQKNIHLNDETESTVGLVLEEALYSMAESTVRILSSFVLMNLKD
SQAAQFLRLAVRFYKQLAQIVKLRIAPKGCKQILPSLKFQKLVELTCKSLTVPLYPFLSE
MQKEQQESVSSNSKGIINKIKQENKCIPDLIFQIEDCERYLIQLSKVTKLNLLRHAKRST
ARDFKIIEDAEPPAGDEDGGNQEEETEIQNNNFGINEDDLRQESDDDGSEEMLSPRNASS
VSSPGLDSDKAIAAETEEDDEEEKEEQEEGKEESGDNRPKKMAKKSWVVEDSDEDSETF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgtcgccgccgccgaagaaccgactcagagacctttcaccgacaacgatgtc
attcgtttagcacagtaccaccattgtcaaaccggattctctctcccaccttaccttctc
tcaccatcttcccacgattctcttctctcatacctcaaatctcgctcttcttcaccatct
ccgtcgaaaccagtttctgagtacgtgatcgctcttctatctctaatttcactctctcct
actactccgtctctctcgtctctcctcgcctctcttctcatctcctacacacaaatcttc
aattccggcaaaatcccaagcgattcggattctctcaagacgattcagctcttcggtact
ctcttacgacacttacacgttaaggaggtgaaatttgtagtcgattcgatcttattaggt
gtgtctagagttatcactgttgatgaagcccagttgtttgatttattgcctgtgtgcttt
gatttattgcggaattcgagagaagctaaagctagtgaaatcgatttcgttgattcggcg
attgatcgtgttcttagttgtgaatggagtaaagggttgttgacgaaaatggtatctcta
gctaaggagttttcgtttctggataaagggagaaagagtgaattggtggagaaagtgttt
cttggtattaagttgatagacttgcaggatttgccttcacttgtgtatcaattgttggtt
cttgcttctaaaggtttttgcaagagggaagtgattggaggtgttgttggtttttttgga
tctaaagctgagactagagtagcttctgttgttagacagatagaaggaactgttcttctt
catgtgaatttcgcagtgaagcaggatccttcattggggctagaggttgtggcgttagtc
aaatctgatcttagagctttcaatcattttacagttgcggttctgttttcggttgctcgg
gttagaaagtttggtgagaattccttagggattttgagaacggctttgcttaatgcgtac
aatgattatcgactctccaaagattgcaagtggctacctgatgagcttaaggaagacagt
ttcctgcatgccaaattggttgaaaaatctttgctaagagcggttagtgagtgcagatat
gggagagagcatgtggttccaagtgttatccagtttggatttatgttgctagaatctgtc
gaagaaagtagatccaatgagtttggtgattctaatggtgtattgggtattgagaagctt
agcattcagattttgggaaccctatttgaagtccatgatatgacaagaaacgagataatt
gagcaatgcaagtttcgcattctttctttgaaatgcgcaaagagcaagccaatagtaagg
ttgttaaggtatcttgtccagagatactcacttatcatgttggaatttgtccaccatctc
aaagagttattgggttatttcactttcatggagggaaatatcagctgtcttcttgtttct
gctgttatcccgctcatcaaattcagccatgaccttcaggactataccatcttggtgatt
cgcaaggctatgtttagacgcgaatatacagttcgtgttgcagcgacaaaggttataact
gatcttatacttgcagagaaacaagctaagagagacggttcatttactttacaagactca
tcaagccaagccagttccagtcagcagactgagatgagctgtatagtgaggggaaacctc
ttcactgaactgaatgggttgcttcaaagatgtctttaccaacaggcattagtgaaggaa
gtagtttatgatgggcttgtgaagttagtcttgattgatccatcaactggaggacatgtt
ttggactttcttatgcctcactttcttcgtttcttcagacaggacacagattttcagctc
ggaatcatttcatgcattaaattagaaggtggaaaatatatcattgaagagcccttggat
aggcttctcttttgtatctcttggattttactcctccaggtgcacaacagctcggatcgg
ccttccgatgccgcgtggccatgctttggtttctcactttcacaagataatgagcagcag
ggagggagaaacatatctcatgaagtttactccaatgctttggtgaagatccgaaacttc
ttactaggcaagaatttagaagatattgttgggcagtctcaggacacagtttccgcatct
ctagaagacgataaaagaaaatcctattgtttgattatattgggaatcattcaagtgcag
ctaaattatattatagtggatctagagaaacagcctgaagggaaaaagggtgctgtcaga
aaagagattgtcgatttgattgatctttatgaatcactggaaaaagacgtggggaaatta
aaaccgagcaatattggcaagagggtacgatttagcacctgtaatgatactgatgcggga
aacacaagtatcagtgaagagcgagaaaaagttccctttttggcaacttcaagtatctac
cagctatttcttcttagtttcaaactctatagcagcaaatccgttggtactctttcaggt
tcgcaggatcacagccagtcatcaccagccaagacagaaaaatcaatttctaaaattttc
tccttcactttgcaagtgtgtgttgggcacataagatcatctctttgcatgaaggaggaa
aatccacttaaaccgttggtctgtggtgacatgaaagttctgggtcctccactgctaaaa
gtactttacctgctaaagccagatccacctctagcgaccggacagaccaagaaggacagt
aaaggaaagaaggatgctgaaggaagaaaacagtgtctacatctggccttacttagcttg
aaagagctgctcaatatatattcaagtggatctggtttgactggcttgcttgaagatttg
ttggcagtacctgcatccgaggatgctactttagaagagtgcagggaagcttcaagaatt
gaagacccacttgtaaagggcatcgaaattttcatggagaaaatcatgaagcccatgatc
acggactttatcgcgcaaaactctaatgatgtagagattctttgtgctataatgttgaag
cttgggaacaatctaccagacaaatccaaacaaaggcatggatcatgggctcatcaaatg
tgcagaagctgtgaaacatctaacaccactgtggcaaagagcattgtgaaacttgccatc
tcttttaccacatcacctggtgatctatgcatagccgttgaagtggctaaggagttgcaa
aatatcatgggtttagacaaatctgatacgttagaagtgtctgagtcatacatggtcata
aaccagtcaactagtgcttctgtaacttcttgcatattgcaatcaactgattcagcaata
gttgaaatggattgggccacaaagaagctaaagaatttctatgtggtctctcagaagaac
atccatctcaacgatgaaactgagagtacagtcgggttggttctcgaggaagccctttac
tcaatggctgagtcaacagtcagaatactttcttcctttgtgttgatgaacctcaaagac
tcgcaagcagcgcagtttcttagactagcagttaggttttacaaacaattggcacaaatt
gtgaagctgaggattgctcccaagggctgcaagcaaattcttcccagccttaaatttcaa
aaactggtggaactaacttgcaagagtctcacagttcctttatatccctttttatctgaa
atgcaaaaggaacaacaagaaagtgtgagttccaattccaagggcataatcaataagatc
aaacaggagaacaaatgcattcctgatttgatattccagatagaagactgtgaaagatac
ctaattcagctaagcaaagttactaaattgaatttgttgaggcatgccaagcgcagcacc
gccagagactttaaaataattgaagatgcagaacctcctgcaggagatgaagatggtgga
aaccaggaggaagagacagagatacagaacaataactttggcattaacgaggatgattta
agacaagagtcagatgatgatggttcagaagaaatgttgtctccccgaaatgctagttcc
gtatcatcaccgggcttagattctgataaagcaatagcagcagaaacagaagaggacgac
gaagaagaaaaggaagaacaagaagaaggaaaagaagaaagtggcgataatcgtcctaaa
aagatggctaagaagagttgggttgtggaagattctgatgaagattctgaaacattttag
DBGET
integrated database retrieval system