Arabidopsis lyrata (lyrate rockcress): 9301905
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Entry
9301905 CDS
T01578
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9301905
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP100
9301905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
TniB
UVR
AAA_14
AAA_28
NACHT
Mg_chelatase
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
9301905
NCBI-ProteinID:
XP_020871170
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MAMATRVLAQSTPPSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFLGLRGNNA
LDTLGKNRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNF
VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRV
LELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNE
VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL
IGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME
EIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK
DPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDSLVAAAQLSYQYISDRF
LPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDRE
IELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLL
KMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA
YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKK
EIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD
AEGNVTVLNGGSGTPTTSLEEQEDSLPVA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccacaagggtgctggctcaatctactccaccatctttggcttgttaccag
aggaatgttccctcccgtggatctggaagatcgagaagatcggtgaaaatgatgtgtagt
cagttacaagtttctggattaaggatgcaaggatttttgggattacgtgggaacaatgct
ttagacactctagggaaaaaccgtcaagatttccattcgaaggtgcggcaggcgatgaat
gtgcccaaggggaaagctagccggtttacggtgaaagcaatgtttgaaagatttactgag
aaagctatcaaagttattatgcttgctcaggaggaagctagaagactaggccacaatttt
gtgggaaccgaacaaattcttctaggtctcattggtgagggtactggaattgctgctaaa
gttttgaaatccatggggattaacctaaaagatgcacgtgtggaggtggagaagattatt
ggaaggggcagtggctttgttgctgttgagatcccattcactcctcgtgcaaagcgtgtt
cttgaactctcactggaagaagctcgccaacttggtcacaattacattggatccgagcac
cttcttcttggattgctacgtgaaggtgaaggtgttgcagctcgtgtcctggaaaattta
ggtgcagatcctagtaatattcgcactcaggtgatacgcatggtgggtgagaacaatgag
gtaactgctaatgttgggggaggaagcagcagcaataagatgccaactcttgaagagtac
gggacaaacttgacgaaactggctgaggagggtaaattggacccagttgttggaaggcag
ccacagatagaacgtgtggtacaaattcttggcaggagaaccaagaacaacccttgtctt
attggagaacctggtgttggtaagacagctattgctgaaggacttgcacagcgtatagcc
agtggagatgttcctgaaaccattgaagggaagaaggttataacacttgacatgggtctt
ctagttgctggaacaaaatatcgtggagagtttgaagagagattaaagaagcttatggag
gaaataagacagagcgacgagataatcttatttatcgatgaagtgcatactttgattggg
gctggagcagcggaaggtgcaattgatgcagctaacattttaaaacctgctctcgctaga
ggtgaattacagtgcattggagcgacaacattagatgaataccgaaagcacattgagaaa
gatcctgcgttggaaagaagattccagccggtgaaagtacctgaacctaccgtggatgaa
actattcagattcttaagggtctgcgagagagatatgaaattcaccataagcttcgttac
actgacgattctttagtagcagctgcacagttgtcataccagtatattagtgatcgtttc
cttcctgacaaggcaattgacttgatcgatgaagctggttctcgggttcgacttcgtcat
gcacaggtccctgaggaagctagggagcttgagaaggagcttaggcagataacaaaggag
aagaatgaagctgtccgtggccaagactttgagaaggctgggacacttcgggatagagaa
attgaactcagagctgaggtatctgctatccaagcgaaaggcaaggagatgagcaaagca
gagagtgagactggtgaggaaggtcctatggtcacggagtcagacatccaacacattgta
tcttcatggactggtattcccgtagagaaagtatcaactgatgagtctgatcgcctcctc
aagatggaagaaaccctccacaaacgtatcataggccaagacgaagctgtgaaagccata
agccgagccattcgccgtgcacgtgttggactcaagaaccctaaccgtccaatagctagt
ttcatattctcgggtccaaccggtgttgggaaatccgagcttgccaaagctttggcagct
tactacttcggatctgaagaagccatgattcgtctagatatgagtgagttcatggaaagg
cacaccgtctccaaactcatcggttcacctcctggatacgtcgggtacaccgaaggaggt
cagctaacagaagcagttaggcgtcgcccttacaccgtcgttctattcgatgagatcgaa
aaagcccatccagatgttttcaacatgatgcttcagatccttgaagacggtagattaaca
gacagcaaaggaagaacagttgacttcaaaaacacacttcttatcatgacatcaaacgtc
ggaagcagcgtgatcgaaaaaggaggaagacgtatcgggttcgacttagactacgacgag
aaagacagcagttacaacagaatcaagagccttgtgaccgaggagctgaaacagtacttc
agaccagagttcttgaacaggctagacgaaatgattgtattcagacagctaacaaaactg
gaagtgaaagaaattgctgacatactgttgaaggaagtgttcgagaggttaaagaagaag
gagatcgagctccaggtgactgagaggttcaaagagagagtagtagacgaaggttataac
ccgagctacggagcaagaccgttgagaagagccatcatgaggcttttagaggatagtatg
gcagagaaaatgcttgcgagagagattaaagaaggagactcggtgattgtggacgttgac
gctgaaggcaacgtcacagtgctaaatggtggaagtggcactccaactacttccttggaa
gagcaggaagattctctccccgttgcttga
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integrated database retrieval system
