Arabidopsis lyrata (lyrate rockcress): 9301926
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Entry
9301926 CDS
T01578
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9301926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9301926
Spliceosome [BR:
aly03041
]
Complex A
Other components
Complex A specific factors
9301926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
RRM_5
PHD_4
KH_PNO1_2nd
RapA_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
9301926
NCBI-ProteinID:
XP_002865852
UniProt:
D7MQZ2
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MESVELINPNPNSQTLAQPPPSSNGDTAPLASDHMNPQNSESVTLNGTNGSSAKPEFLRP
LLSENGVSKTLSGNDKDQSGGEEETTSRRKRRSRWDPPPSESGNNPSAEGSTDSGTGTRK
RKSRWADDEPKPHIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQ
RSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKL
FIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDPSE
NEDLHVLVEAETQDALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRL
CGEPGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGG
TVPESSLKQSATLALGPGSSGSNPPWANNAGNGASAHPGLGSTPTKPPSKEYDETNLYIG
FLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYR
FEGRTLAVRIAGKVPPPTAPPGPPAPQPPTQGYPPSNQPPGAYPSQQYATGGYSTAPVPW
GPPVPSYSPYAPPPPPPGSYHPVHGQHMSPYGMQYPPPPPHVTQAPPPGTTQNPASSEPQ
QSFPPGVQADSGSATSVPPNVYGSSVTAMPGQPPYMSYQSYYNAVPPPPPPAPASSTDHS
QNMGNMPWANNPPVSTPDHSQGPGNAHWAPTPPMPPTVGYSQSMGNVPWAPKPPVQPPAE
NPSAVGDSEYEKFMAEMK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgtcgaattgatcaatcccaatcccaattcacaaaccctagctcaacctcct
ccttcctccaacggagacactgctccactcgcatcggatcatatgaatcctcagaattcg
gaatctgtgactttaaacggtactaatggttcatcagcaaagcctgagttcttgcgtcct
ttgctatcggagaacggtgttagcaagacgctgagtggtaacgataaggatcagtctggt
ggagaggaagagactacaagccggaggaagcgtcggagccggtgggatcctccgccttct
gagtcgggtaataaccctagcgctgaagggagtactgattccggtactggaactaggaag
cgtaagtcgagatgggcagatgatgagcccaagccgcacattcagttacctgattttatg
aaggatttcactggaggtattgagtttgatcctgagattcaagctttgaatagtaggtta
cttgagattagtaggatgttgcagtctggtatgcctttggatgatagaccggaaggacag
aggtctccttcaccagagcctgtgtatgataacatggggattaggattaacactagagag
tatagagcaagggagaggttgaatagagaaagacaagaaattattgctcagattatcaaa
aagaatccggcttttaaacctccagcagattataggcctcctaagctccataagaagctt
ttcattccaatgaaggagtttcctggttacaattttattggtctgattattggccctagg
ggtaatactcagaagagaatggagagggagacaggtgctaaaattgtaattcggggtaaa
ggatcggttaaagaaggtaggcatcagcagaaaaaggatttgaaatatgacccttcagag
aatgaagacttgcatgttttagttgaggctgagactcaggatgctcttgaagctgctgct
ggtatggttgagaagcttctgcaacctgttgatgaagtgttgaacgagcacaagaggcaa
cagctcagggaacttgctaccttgaatgggacaataagggatgaagaattctgtagactg
tgtggtgagccaggacatagacagtatgcatgtccgtctcgtaccaatacctttaagagt
gatgttctttgcaagatttgtggtgatggtggacaccctactattgattgcccggtgaag
ggtactactgggaagaaaatggatgatgaatatcagaacttcttggcagagttaggagga
actgtacctgaatcttctctcaaacagagtgctacgctggctcttggtccgggaagttcg
ggaagtaatcctccatgggctaataatgcagggaatggtgcaagtgcgcatcctggctta
gggtcaactccgaccaaacccccctccaaagaatatgatgaaacaaatctgtacattggg
ttcttacctccgatgcttgaggacgatggtttgattaatctgttttcatcctttggtgaa
attgtgatggcaaaggtaatcaaggaccgtgtgactgggctgagcaaaggctatggtttt
gtgaagtacgctgatgtacagatggccaatactgctgttcaggcaatgaatggctatcgg
ttcgaaggccgaacactcgctgtcaggattgcaggcaaagtgccaccgcctactgcacct
ccagggcctccagctcctcaaccaccaactcaaggttatcctccctcaaaccagccgcca
ggtgcctatccttctcaacagtatgccactggtggttattcaacagctccagttccttgg
ggtcctcccgttccttcctattctccatatgctcctccccctcctcctcctggttcttac
catcctgtccatggtcaacatatgtcaccttatggaatgcaatacccaccaccaccacct
catgtgacacaagcacctccacctggcactactcaaaacccagcttctagtgaaccccag
caaagcttcccaccaggagtacaagctgacagtggttctgctacgtctgtaccaccaaat
gtctatggtagctcagtcacggctatgcctggacagcctccatatatgagttatcagtct
tactacaatgctgttccccctccaccacctccagcaccagcctcgtctactgatcattcc
caaaacatgggtaacatgccatgggccaacaatcctcctgtctcaacacctgatcactcg
caaggtcctggtaatgcacattgggcacctactcctcctatgccgcccactgttgggtat
tcacagagcatggggaacgtaccctgggctcccaaacctcctgtacagccacctgcagag
aatccatccgctgttggagattctgagtatgagaagttcatggctgagatgaagtag
DBGET
integrated database retrieval system