KEGG   Arabidopsis lyrata (lyrate rockcress): 9301926
Entry
9301926           CDS       T01578                                 
Name
(RefSeq) branchpoint-bridging protein
  KO
K13095  splicing factor 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9301926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9301926
Spliceosome [BR:aly03041]
 Complex A
  Other components
   Complex A specific factors
    9301926
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP RRM_1 KH_1 KH_12 zf-CCHC eIF3g RRM_5 PHD_4 KH_PNO1_2nd RapA_C zf-CCHC_2
Other DBs
NCBI-GeneID: 9301926
NCBI-ProteinID: XP_002865852
UniProt: D7MQZ2
LinkDB
Position
Unknown
AA seq 798 aa
MESVELINPNPNSQTLAQPPPSSNGDTAPLASDHMNPQNSESVTLNGTNGSSAKPEFLRP
LLSENGVSKTLSGNDKDQSGGEEETTSRRKRRSRWDPPPSESGNNPSAEGSTDSGTGTRK
RKSRWADDEPKPHIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQ
RSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKL
FIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDPSE
NEDLHVLVEAETQDALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRL
CGEPGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGG
TVPESSLKQSATLALGPGSSGSNPPWANNAGNGASAHPGLGSTPTKPPSKEYDETNLYIG
FLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYR
FEGRTLAVRIAGKVPPPTAPPGPPAPQPPTQGYPPSNQPPGAYPSQQYATGGYSTAPVPW
GPPVPSYSPYAPPPPPPGSYHPVHGQHMSPYGMQYPPPPPHVTQAPPPGTTQNPASSEPQ
QSFPPGVQADSGSATSVPPNVYGSSVTAMPGQPPYMSYQSYYNAVPPPPPPAPASSTDHS
QNMGNMPWANNPPVSTPDHSQGPGNAHWAPTPPMPPTVGYSQSMGNVPWAPKPPVQPPAE
NPSAVGDSEYEKFMAEMK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggagtccgtcgaattgatcaatcccaatcccaattcacaaaccctagctcaacctcct
ccttcctccaacggagacactgctccactcgcatcggatcatatgaatcctcagaattcg
gaatctgtgactttaaacggtactaatggttcatcagcaaagcctgagttcttgcgtcct
ttgctatcggagaacggtgttagcaagacgctgagtggtaacgataaggatcagtctggt
ggagaggaagagactacaagccggaggaagcgtcggagccggtgggatcctccgccttct
gagtcgggtaataaccctagcgctgaagggagtactgattccggtactggaactaggaag
cgtaagtcgagatgggcagatgatgagcccaagccgcacattcagttacctgattttatg
aaggatttcactggaggtattgagtttgatcctgagattcaagctttgaatagtaggtta
cttgagattagtaggatgttgcagtctggtatgcctttggatgatagaccggaaggacag
aggtctccttcaccagagcctgtgtatgataacatggggattaggattaacactagagag
tatagagcaagggagaggttgaatagagaaagacaagaaattattgctcagattatcaaa
aagaatccggcttttaaacctccagcagattataggcctcctaagctccataagaagctt
ttcattccaatgaaggagtttcctggttacaattttattggtctgattattggccctagg
ggtaatactcagaagagaatggagagggagacaggtgctaaaattgtaattcggggtaaa
ggatcggttaaagaaggtaggcatcagcagaaaaaggatttgaaatatgacccttcagag
aatgaagacttgcatgttttagttgaggctgagactcaggatgctcttgaagctgctgct
ggtatggttgagaagcttctgcaacctgttgatgaagtgttgaacgagcacaagaggcaa
cagctcagggaacttgctaccttgaatgggacaataagggatgaagaattctgtagactg
tgtggtgagccaggacatagacagtatgcatgtccgtctcgtaccaatacctttaagagt
gatgttctttgcaagatttgtggtgatggtggacaccctactattgattgcccggtgaag
ggtactactgggaagaaaatggatgatgaatatcagaacttcttggcagagttaggagga
actgtacctgaatcttctctcaaacagagtgctacgctggctcttggtccgggaagttcg
ggaagtaatcctccatgggctaataatgcagggaatggtgcaagtgcgcatcctggctta
gggtcaactccgaccaaacccccctccaaagaatatgatgaaacaaatctgtacattggg
ttcttacctccgatgcttgaggacgatggtttgattaatctgttttcatcctttggtgaa
attgtgatggcaaaggtaatcaaggaccgtgtgactgggctgagcaaaggctatggtttt
gtgaagtacgctgatgtacagatggccaatactgctgttcaggcaatgaatggctatcgg
ttcgaaggccgaacactcgctgtcaggattgcaggcaaagtgccaccgcctactgcacct
ccagggcctccagctcctcaaccaccaactcaaggttatcctccctcaaaccagccgcca
ggtgcctatccttctcaacagtatgccactggtggttattcaacagctccagttccttgg
ggtcctcccgttccttcctattctccatatgctcctccccctcctcctcctggttcttac
catcctgtccatggtcaacatatgtcaccttatggaatgcaatacccaccaccaccacct
catgtgacacaagcacctccacctggcactactcaaaacccagcttctagtgaaccccag
caaagcttcccaccaggagtacaagctgacagtggttctgctacgtctgtaccaccaaat
gtctatggtagctcagtcacggctatgcctggacagcctccatatatgagttatcagtct
tactacaatgctgttccccctccaccacctccagcaccagcctcgtctactgatcattcc
caaaacatgggtaacatgccatgggccaacaatcctcctgtctcaacacctgatcactcg
caaggtcctggtaatgcacattgggcacctactcctcctatgccgcccactgttgggtat
tcacagagcatggggaacgtaccctgggctcccaaacctcctgtacagccacctgcagag
aatccatccgctgttggagattctgagtatgagaagttcatggctgagatgaagtag

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