Arabidopsis lyrata (lyrate rockcress): 9301930
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Entry
9301930 CDS
T01578
Name
(RefSeq) F-box protein At5g51370
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9301930
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
9301930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At5g56370
F-box
F-box-like
LRR_RPS2
F-box_5
Motif
Other DBs
NCBI-GeneID:
9301930
NCBI-ProteinID:
XP_002864107
UniProt:
D7MQZ8
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MSEFDKHVLNHNKNEKPFSQIKSSEIDSTLSLSDSLLLKILEKLPESQSNDVSLVCKRWL
NLQGRRLRSLKVLDFDFVLSERLTTRFPKLTHVDLVNACMNPPVNSGILLCHKSIYFHLS
SESSNWEFLEENLLHSDVIDRGLSVLSRGNCDLLKLVVINATELGLLSLAEDCSDLQELE
LHKCNDNLLHGIAACKNLRALRLVGSVDGLYSSSVSDIGLTFLAQGCRSLVKLELSGCEG
SFDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYFESLKILRISSCRKIDASPGPEKLL
QSCPAMESLQLKRCCLNDKEGMRALFKVCDGATEVSIQDCWGLSDDTFSLAKAFRRVRFL
SLEGCSVLTSGGLESVILHWEELESMRVVSCKSIKDSEISPALSSLFSLLKELTWRPDTR
SHLSSSLEGAGIGKRGSKFFKKSVLH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttgataagcatgtcctaaatcacaacaaaaatgagaagcctttcagtcaa
atcaaatcctcagaaatcgattcaactctctctttatccgattctcttctcctcaagatc
cttgagaagcttcctgaatcacagagcaacgatgtctcacttgtctgcaaacggtggttg
aatcttcagggacgtcgtttacggagtttaaaggttcttgattttgattttgtcttgtct
gagagacttaccacgagattccccaagctcacgcatgtcgatttggttaacgcgtgtatg
aatccgccggtcaattcgggtattttgctctgtcacaagtcgatttattttcatttatct
tcagagtcatcgaattgggagtttcttgaggagaatttattgcacagtgacgtaattgat
agagggcttagcgtattaagcagagggaattgtgatttgcttaaacttgtagtgattaac
gctactgaattgggattactgagtttagctgaagactgttctgatttgcaagaattagaa
ttgcataagtgtaatgataatctcttgcatggcattgctgcgtgtaagaatcttagagcg
ttgagattggtaggaagcgtagacggattgtatagttcatcggtgtcggatatagggttg
acgttcttagcacaagggtgtaggagtttggtgaagcttgagcttagtggttgtgaaggt
agctttgatgggattaaagcaattgggcaatgttgtgaagtgcttgaggagctgagtatt
tgtgaccatagaatggatgatggttggatagctgcgctttcgtattttgagagtttgaag
atattgaggatttcgtcgtgtagaaagatagacgctagtcctggaccggaaaagttgttg
cagtcttgtccagctatggagagtttgcaactcaagaggtgttgtttgaatgacaaggag
gggatgagagcgttgtttaaagtgtgtgatggagcaacagaggttagtattcaggattgc
tggggattgagtgatgatactttcagcttggctaaagctttcaggagggtgaggtttctg
tctttggaaggatgctcagtcttgacatctggcggtttagagtcggtgattttacactgg
gaagagcttgagagcatgagagtagtgtcatgtaaaagcataaaagacagcgaaatatca
cctgcgctctcgtcattgttctcacttctcaaagaactaacgtggagaccagacactagg
tctcatctctcttcgagtcttgaaggtgccgggattggaaagagaggcagcaaattcttc
aagaagagtgttctacattga
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