Arabidopsis lyrata (lyrate rockcress): 9302030
Help
Entry
9302030 CDS
T01578
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9302030
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
9302030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
9302030
NCBI-ProteinID:
XP_020882286
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI
EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTVEGE
DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFSDEETATSAKNALDGRSIPRYL
LAEQVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQVAVGVDGKKME
PESNVLLASIENMQYAVTLDVLHMVFAAFGDVQKIAMFDKNGGLQALIQYKDVQTAVVAK
EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPSQNPYTGNP
QQYHAAGGSHQQQPQGGWVQPGGQGSMGMGGGGYNPYMAPPSSSSMHHGPGGHMPPHHYG
GPGPMH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgtttcaagccagccacagtttcgttacacgcaacctccttcaaaggttctt
catttgagaaacttgccatgggaatgcactgaagaagagttaattgaactgggaaagcct
tttggtacagttgttaatacaaagtgcaatgttggagctaatcgaaatcaagctttcatt
gagttcgaagatttaaatcaagctatacaaatgatttcttactatgcttcttcgtcggag
cctgctcaagttcgaggtaaaactgtctacctccagtactccaataggcaagagatagtg
aataacaagaccacagcggatgttgtggggaatgttcttctggtgactgtcgaaggcgag
gatgctcgtatggtcagcattgatgtcttgcatctggtattctcggcatttgggtttgtc
cacaagattactactttcgagaagacagccggataccaggcactggttcaattttctgat
gaggaaactgcaacctctgcaaaaaatgccctcgatggaagaagcatccctaggtatcta
ctcgctgagcaagtgggacaatgctcacttaaaatcacatattcagctcatacagatctg
actgtcaaatttcagagtcatcggagcagggactatactaatccttaccttcccattgct
ccatcagccattgacagtactggtcaggtggctgtgggtgtagacgggaagaagatggag
cctgaaagtaatgttcttctcgcatccattgaaaacatgcagtatgcagtaaccttggat
gttctacacatggtttttgcggcttttggggatgttcaaaaaattgcaatgtttgacaag
aatggtgggctacaggcactgatccaatacaaagatgttcaaacggctgttgtggcgaag
gaagcattggaaggacattgtatctatgatggtggtttttgtaagctccacattacttat
tcacgccacactgacctcagcataaaggtgaacaacgatagaagcagagactacacaatg
cccaacccaccggttccaatgcctcaacaacccagtcagaatccatacactggcaatcct
cagcaataccacgcagcaggtgggagccaccagcagcagccacaaggtggatgggtccaa
ccaggagggcaaggctcaatgggaatgggtggtggtggttacaatccttacatggcacca
ccatcttcaagctcaatgcatcatggtccgggtggtcatatgcctccacatcattatggt
ggtcctggtccaatgcattag
DBGET
integrated database retrieval system
