Arabidopsis lyrata (lyrate rockcress): 9302109
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Entry
9302109 CDS
T01578
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9302109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9302109
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9302109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
9302109
NCBI-ProteinID:
XP_002866035
UniProt:
D7MU74
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MATEHESTRASRFSRDSSSVGYYSEEDNTEEEEEDEEEMEEIEEEEEEEEEEDPRVGLAC
GGRRNGSSNNNKWMMLGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMC
LLVDGWLALTVTALRSMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGSTRVA
PPYVKKNGFFFDFFVILPLPQVVLWVVIPSLLRRGSVTLVVSVLLVTFLFQYLPKIYHSI
RHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTMG
CDIRMLSCKEPVYYGTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSNE
SRLEKILFPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHAT
TSKKQAMHLKMRNIEWWMKKRHLPLGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRR
DIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGH
LQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDA
EDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPR
RPLSRCASLGEDKLRLYTAILTSPKPNPDDFDDY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccacagagcacgaatccacacgcgcatcacgcttctcacgtgactcaagcagcgta
ggatattactcagaagaagataacacggaggaggaagaggaagatgaagaagagatggaa
gaaatcgaagaagaggaggaagaagaggaagaagaagatccacgtgtaggtctcgcgtgc
ggaggaagaagaaacgggtcaagtaataacaacaaatggatgatgttgggtcggatactt
gacccgagatccaaatgggttcgagaatggaacaaagtctttctccttgtatgcgcgaca
ggtctattcgtagacccactttttctctataccctatcagtgagcgatacgtgtatgtgt
ctcctcgtcgacggttggcttgctctcaccgtcactgccttacgctccatgaccgatctt
ttgcacttgtggaacatttggattcagttcaagattgctcgccggtggccttatcccggc
ggagatagcgacggcgataccaacaaaggaggtgggacacgtggctctacgagggttgct
ccaccttacgttaagaagaatgggttcttcttcgatttcttcgtcatcttaccattgcct
caggtggtgttgtgggtggtgataccttctcttctaaggagaggttctgtgactttagtg
gtgtcagttttgcttgtaacattcctcttccaatatctaccgaaaatatatcattcaatc
cgccatctccgccgcaatgctacgctctcgggttacatcttcggcaccgtctggtgggga
attgcactcaacatgatcgcttatttcgtcgcggcccatgcagcaggagcatgttggtat
ttgttaggagttcaaagatctgcgaaatgtcttaaagaacaatgtgaaaacacaatggga
tgcgacataaggatgttgtcatgtaaggaacctgtgtactatggaacgaccgtaatggtc
cttgatagagctagacttgcttgggcacaaaaccatcaagcccgatctgtttgcttagat
ataaacaccaactacacatatggggcttatcaatggaccattcaacttgtgagcaatgaa
agccggttggagaaaatcctttttcctatcttttggggtctcatgactctcagcacattt
gggaatttggagagcacaacagaatggtcggaggttgtcttcaatatcatagttctaaca
agtggtcttcttctcgttaccatgttaattggtaatatcaaggtgtttctgcacgcaaca
acttcaaagaagcaagcaatgcacttgaaaatgaggaacatagagtggtggatgaagaag
agacacttgccattagggtttaggcagcgagtccgcaactatgagcggcaaagatgggct
gctatgcgcggtgtagacgagtgtgaaatggttcagaaccttccagaaggtcttaggaga
gacatcaagtaccatctatgtctagacttagtccggcaggttccattgtttcagcatatg
gatgatttggtgcttgagaatatatgcgaccgtgtgaagtctctcattttcaccaaagga
gaaacaattcagaaagaaggagacgcagtgcagagaatgttattcgtagtgagaggtcat
cttcaaagcagtcagttactaagagacggcgtcaagagctgttgcatgttaggtccggga
aattttagtggcgacgagcttctctcgtggtgtctccgacgacccttcgtggagaggcta
ccgccgtcctcttcaacgcttgtaacactcgagaccaccgaagcgtttggcctcgacgcc
gaagacgttaagtacgtgacgcaacattttcgttacacttttgttaacgagaaagtcaaa
cgcagtgcccgctattattcccctggatggcggacttgggctgcggttgcggttcagctt
gcttggcggaggtacaagcataggctaacgttgacgtcactgtcgttcatacgaccgcga
agaccattgtcaagatgtgcatccttaggagaagataaattgaggctctatacagcaatt
ttaacctctcctaaacctaatcccgacgatttcgatgattattga
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