Arabidopsis lyrata (lyrate rockcress): 9302161
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Entry
9302161 CDS
T01578
Name
(RefSeq) DNA topoisomerase 1 beta
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9302161
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
9302161
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Topoisomerases
9302161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
B-prop_COPA_B_2nd
Fn3_PTPRU
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
9302161
NCBI-ProteinID:
XP_020890015
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKRTSNTASTTNRSRPIDNAMRNSVIGSTKS
PPPMRSPLTSPNRSASSSARSSMMKPTTLPSSSSVQRSTVKSPLRDDRSVVAKERNGLGK
APSVSKTDDEDSEDDKPLSARLKMDSKEVIKQPSSSGRGNTQQAVQKSNMRPQGSSDNTK
KKVLDERAPVSSMVQTKTSVGTSSSKPVHNEQKRPLVNNINRNGLKPKTEGVSSQAPAKR
PLEKGSSSNQSSVKRLKLSEPARPVKVEQGSHNAATQDAKGKNLDASKPLRANKAIVKED
NSDDDDHVPIASRIKSDSSKFSSAKPSSSKTIASSSRIIAKKPNKWVKDSKYSKSSKSLP
SGDGQTKWKTLEHNGVIFPPSYKRHGVKILYQGKPVDLTPEQEEVATMFAVMRETEYYNK
PKFRENFWNDWRRLLGKNHIIKNLDDCDFTPIYEWYIQEKETKKLMTAEEKRILKEEKLK
QEEKYMWAVLDGVRERIGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKEAPVP
ECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLH
NYIGSIRAAYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNV
ECIPPNKLKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHL
KELMAGLTAKVFRTYNASITLDLMLSKETRDGDVPEKVVVYQQANKEVAIICNHQRTVSK
SHGAQVEKLAVKIEELREQIKELNIDLNRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQT
QGKIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFAW
AMDVDPEFRFCLSNDE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggccactgaggcgtttgtgaagccagttgtgccaaatggtcatgacgggtacgaggat
gaagatgaagatgacattcctttggtgtttaagagaaccagtaatacagcatcaaccaca
aatcgttcaaggcctattgataatgctatgagaaactcggttattggctccaccaagtcc
ccaccaccaatgaggtctcctttaacaagcccgaataggtcagcttcttcatccgctaga
agttcaatgatgaaaccaacaacattaccgtcatcttcatctgttcaacgttcgactgtg
aagtcaccgttgcgagatgatagatccgttgttgctaaggagaggaacggtttgggaaaa
gctccctctgtctccaaaactgatgatgaggattctgaggatgataaacccttgagtgcc
agacttaaaatggattctaaggaggttatcaaacagccgagctcttccgggcgtgggaat
acgcagcaagcagtacagaagagcaacatgaggcctcagggatcgagcgataacactaaa
aagaaagttttggatgagagagctcccgtgtcctcaatggttcagacaaagaccagtgtg
ggtacatcaagtagcaagcctgttcataatgaacagaagagacctttggttaacaatatc
aatcggaatggcttaaaaccgaagactgaaggggtcagttctcaggcacctgctaagaga
cctcttgagaaggggagttcttcgaatcaatcttctgttaagaggctcaagctgtcagag
ccagctagaccagtgaaagtggaacaaggttcacataatgcagctacgcaagatgccaaa
ggaaagaatctggatgcatcaaagccgttgagagctaacaaagcaattgttaaagaagat
aactcagatgatgatgatcatgttcctattgcctcaaggataaagtcagattcctcaaaa
ttttcctccgcgaagccaagttctagtaaaacgatcgcttcttcatccagaataatagct
aaaaagcccaacaaatgggtgaaagattctaagtattcgaaatcttcaaaatcattacct
tctggagatgggcaaacgaaatggaaaactctagagcacaatggtgtcatttttccacct
tcatataagcgtcatggggttaagatattgtatcagggaaagcctgttgacttaactcct
gaacaagaagaggttgcaactatgtttgcggtgatgagggaaacagaatattacaataaa
ccaaagttcagagagaatttctggaatgattggcggagactacttggaaagaaccatata
attaaaaatttggatgattgtgacttcactcccatatatgaatggtatatacaggagaag
gagacaaagaaactaatgactgcagaagagaaaaggattttgaaagaggagaaattaaag
caggaggagaaatacatgtgggctgttcttgatggtgtcagggagaggattggaaatttc
agagttgagccccctgggttgtttcgaggccggggagaacatcctaagatggggaaactg
aaaaagcggattcgtccttgtgatattacaatcaacattggtaaagaggcgcctgttcca
gaatgccctatccctggtgaaagatggaaagaagttaagcatgacaatactgttacctgg
cttgctttttggaatgatcctatcaatccaaaagagttcaagtatgtattcttggcagct
agcagttcgttgaagggacaaagcgacaaggagaagtatgagaaagcgaggaagctacat
aactatatagggagtattagagcagcatacaccaaagattttaataacaaggatgtaaca
aagcggcaaatagcagttgcgacatatctcatcgataagctagcccttagggctggaaat
gagaaggatgacgatgaggcagatactgttggttgctgtacattgaaagtaggaaatgtg
gagtgtattcctccaaataagttaaagtttgacttccttggtaaggactctattcagtat
gtaaacacagttgaggttgagcctctggtgtataaggcaattgggcagttccaagcggga
aaatcgaaaaccgatgatctatttgatgagctagatacttcaaaactcaatgctcatctt
aaggagcttatggctggtctcacagccaaagtcttccgtacatataatgcatccatcaca
ttggatttaatgttgagtaaagaaaccagagatggtgatgttcctgaaaaagtggtggtt
tatcagcaagcaaacaaggaggttgctatcatttgtaaccatcaacgtactgtgtcaaaa
tctcacggagcacaagtcgagaagctggctgtgaaaatagaagaactaagggagcaaata
aaagagctgaatattgatctcaacagggctaaaaaaggaagaacaccattaatgggatct
gatggaaagagaaagaggaacttaacacctgaagcattggagaagaagataatgcaaacg
caaggtaagatcgagaagatggaaagggatatgcaaacgaaggaagatatgaaaaccgtt
gcattgggcacatctaagatcaattacatggatcctaggatcactgttgcatggtgcaaa
cggcacgatgtccccattgagaagatatttaacaagtctcttctggctaagttcgcttgg
gcaatggacgttgatcctgagttcagattctgtttaagcaatgatgaataa
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