Arabidopsis lyrata (lyrate rockcress): 9302192
Help
Entry
9302192 CDS
T01578
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9302192
Enzymes [BR:
aly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
9302192
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9302192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
9302192
NCBI-ProteinID:
XP_002866118
UniProt:
D7ML53
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MPALTRNKKKAATKSPTSPTKQVTKSKAPPSKIQSKPQTSTLKKGAKSQNKPPLKKQKKE
FVEEEPLEDDEDDVSTDEESEELDESDDGEKGSNALFSDDDDEEEEEENDDDEETLGDDF
LVGSGDEDEEGPSDADSDSDDNDIVRKSDAIDRQLAKDKKDAAAEVRDNIKQDGPDEELE
HDAFRLPTEEELAEEARGPPDLPLLKSRIEEIVRALKNFKAFRPKDTTRKACVDQLKDDL
GSYYGYNSFLIGTLVEMFPPGELMELIEAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVN
LDPLSKWSKVGLVIYDSQVPIGATPEYLAGYYMLQGASSFLPVMALAPRENERIVDVAAA
PGGKTTYIAALMKNTGLIYANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLGQN
TVDRVLLDAPCSGTGIISKDESVKITKTVDEIKKFAHLQKQLLLGAIDMVDANSKTGGYV
VYSTCSIMVTENEAVIDYALKKRDVKLVTCGLDFGRKGFTRFREHRFQPSLDKTRRFYPH
VHNMDGFFVAKLKKMSNMKQSSEGDDEAVETVEQAEVSSDDDDDEAEAIEEIEKPSVPDR
QPKEAKEKKNKERLAKSKEDKRGKKDKKSKSENVEEPSKARKQKKKRSEWKNEIAQAREE
KRIAMREKAKEEKQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctcactcgtaacaagaagaaagctgcgacgaaatcgccaacctctccgacg
aagcaggttaccaaatccaaagctcctccatcgaagattcagtcaaaaccccaaacttcg
acgttgaagaaaggagcgaaatcccagaacaaacctccattgaagaagcagaagaaggaa
tttgtcgaggaagagcctctcgaagacgatgaagatgatgtttccacagatgaagaatca
gaagagcttgatgaatctgatgatggagagaaagggtctaatgcgttattctctgatgat
gatgatgaggaggaggaggaagagaacgatgacgatgaagagactttgggtgacgatttt
ctagtaggtagcggcgatgaagatgaggaaggaccatcagatgcggattctgactctgat
gacaacgatattgtgaggaaatctgatgctattgatagacaattagcaaaggataagaaa
gacgctgctgctgaagtgcgggataatatcaagcaagacggacctgatgaagaacttgaa
catgatgcgtttcggctaccaactgaagaggagcttgcagaagaagctcgtggtccacca
gatcttcctctacttaagagtagaattgaagagattgttagagctctgaaaaatttcaag
gctttcaggccaaaagataccacgaggaaagcttgtgttgaccagctcaaagatgatctt
ggttcttattatggttataacagttttcttattggaacattggttgagatgtttcctcct
ggtgaacttatggaacttattgaagcttttgaaaagcaaaggcctacatctatccggact
aacacacttaagactcgaagacgggatcttgctgatgtacttttgaacagaggagtcaat
ctagacccattaagcaagtggtcaaaagttggacttgttatctatgattcacaagtccca
atcggtgcgactcctgaatacttggctggttactacatgcttcaaggtgctagttcgttt
ttgccagtgatggcccttgcccctcgagagaatgaacggattgtggatgtagctgctgct
cctggtggtaaaacaacttatatcgctgctctaatgaaaaatacgggcttaatatatgcg
aatgagatgaaagtacctaggcttaagtcactaactgccaatctgcatcgcatgggggtc
acaaataccatagtttgtaactatgatggaagagagctacctaaggttttaggtcagaac
acggttgatagagtattgttggatgcgccttgcagtgggactgggatcatatcaaaagat
gaatcagttaaaataacgaaaaccgttgatgagataaagaaatttgctcacttgcaaaag
caactattactcggtgctattgatatggtggatgccaattccaaaaccggtggatatgta
gtttattcaacatgttcaattatggttaccgagaacgaagctgtcattgactatgctctt
aaaaagagggatgttaaactcgttacatgtggacttgattttggaagaaaaggatttacc
agatttagagaacaccggtttcagccttctttagacaagactagacgtttctatcctcat
gtacacaacatggacggattttttgtggcgaagctgaagaaaatgagcaacatgaagcaa
tcttcagaaggtgatgatgaggcggtagaaactgtagagcaagctgaagtgtctagtgat
gatgatgatgatgaagctgaggccattgaagagattgagaagccttctgttcctgatagg
caacctaaggaagcaaaagaaaaaaagaacaaggaaagacttgcaaaatcaaaggaggac
aagagaggtaaaaaggataagaaatcaaaatctgaaaatgtggaagagccatctaaagca
aggaagcaaaagaagaagagatctgaatggaagaacgaaattgctcaagctagggaagag
aaaagaatagccatgcgagagaaggcgaaggaggagaagcaatga
DBGET
integrated database retrieval system
