Arabidopsis lyrata (lyrate rockcress): 9302236
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Entry
9302236 CDS
T01578
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
9302236
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
9302236
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9302236
Enzymes [BR:
aly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
9302236
Amino acid related enzymes [BR:
aly01007
]
Aminoacyl-tRNA synthetase
Class II (A)
9302236
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
9302236
Prokaryotic type
9302236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
9302236
NCBI-ProteinID:
XP_002864474
UniProt:
D7MLU9
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MADEIAPPANQLAAVSLGNDGSTVQKAQFSNRVLIRTILDRPDGGAKLAGQKIRIGGWVK
TGREQGKGAFAFLEVNDGSCPANLQVMVDSSLYDLSKLVATGTCVTVDGVLKVPPEGKGT
KQRIELSVVKVIDVGIVDATKYPLPKTKLTLEFLRDVLHLRSRTNSISAVARIRNALAFA
THSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAA
RLIVKERGDVVAKLKAAKASKEEITAAVAELKIAKESFAHIEERSKLKPGLPKKDGNVDY
SKDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFA
DLEDDMNCAEAYVKYMCKWLLDKCRDDMELMAKNFDSGCIDRLELVESTPFGRITYTEAI
ELLEEAVAKGKEFDNKVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDE
KTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGF
GLGFERMILFATGIDNIRDVIPFPRYPGKADL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagattgcccctccggcgaatcaattagccgcagtatccttgggtaacgat
ggatctacggtgcaaaaagctcaattttcaaaccgggttttgattcgaaccattttggat
cgacctgacggcggagctaaactcgccggtcagaaaattcgaatcggtggttgggttaaa
accggaagagagcaagggaaaggagctttcgctttccttgaggttaacgatggatcttgt
ccagcgaatctccaggttatggtggattcgtctttatatgatctctctaagttggttgcg
acgggaacttgtgtgactgttgatggagttttgaaggttccaccggaaggtaaaggtacg
aaacagaggattgagcttagcgttgtgaaggtgattgatgttggaattgtggatgcgact
aagtatccacttcctaagactaagttgactcttgagtttttgagagatgtgcttcatctt
cgttctaggactaactcgatctctgcagttgcaagaatccgtaatgcgcttgcttttgcg
acccatagtttctttcaagaacatagtttcctttacattcacactcctatcatcacaaca
agtgattgtgaaggagctggtgaaatgttccaagcaacaaccttgatcaattacactgag
aggttggagcaggatctcatcgataaccctccgcctactgaggctgatgttgaagctgcg
aggctcattgttaaggagagaggtgatgttgtagcgaaactgaaagctgccaaagcaagc
aaggaagagatcactgctgctgttgctgaacttaaaatagcaaaggagagttttgctcat
attgaagagaggtcaaagcttaagcctggactacctaaaaaagatggaaacgttgattat
tccaaggatttctttggccgtcaagctttcttgacagtttcggggcaattacaagtggag
acgtatgcttgtgctcttagcagtgtgtatacattcggcccgactttccgggcagagaac
tctcacacttcaaggcatctagctgaattctggatggttgagcctgaaattgcttttgca
gatctagaggacgacatgaactgtgcagaggcgtatgtgaaatacatgtgcaagtggttg
ctggataaatgtcgcgatgacatggaacttatggctaagaatttcgactcaggatgcatt
gacaggctagaattggttgaatcaactccgtttgggcgtataacatacactgaagcaata
gagctacttgaggaagctgtggctaaaggaaaggaatttgataacaaagttgagtgggga
atcgacttagcctcggagcatgaaagatacttgacagaggttttgtttcaaaagccactt
attgtctataactacccgaaaggaatcaaagctttttacatgagacttaacgacgatgag
aagactgttgcagccatggatgtcctcgttccaaaggttggagaactcattggtggaagc
caaagggaagaacgatatgatgtcataaaaaagaggattgaggagatgggtctaccaata
gagccatatgagtggtatcttgacttgcgccgatatggaacagtgaagcattgtggattt
ggacttggcttcgaacgtatgattctgttcgctacaggaattgataacatcagagatgtt
attcctttccctcgctatcctggaaaagctgatctttga
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