Arabidopsis lyrata (lyrate rockcress): 9302318
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Entry
9302318 CDS
T01578
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9302318
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9302318
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
9302318
Protein phosphatases and associated proteins [BR:
aly01009
]
HAD phosphatases
Fcp/Scp phosphatases
9302318
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
9302318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
9302318
NCBI-ProteinID:
XP_020888162
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MSVASDSPVHSSSSSDDLAAFLDAELDSASDASSGPSEEEEEAEDDEESGLKRRKLEHLE
TVDEEEIEEASSSKGECQHPGSFGNMCFVCGQKLEETGVSFRYIHKEMRLNEDEISRLRD
SDSRFLQRQRKLYLVLDLDHTLLNSTVLRDLKPEEEYLKSHTHSLQDVSGGSLFMLEFMH
MMTKLRPFVHSFLKEASEMFVMYIYTMGDRAYARQMAKLLDPRGEYFGDRIISRDDGTVR
HQKSLDVVLGQESAVLILDDTENAWPNHKDNLIVIERYHFFASSCRQFDHKYKSLSELKS
DESEPDGALATVLKVLKQAHALFFENVDEDISNRDVRSMLKQVRKEVLKGCKVVFSRVFP
TKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAVREKKYVVHRGWIDA
ANYLWKKQPEEKFSLEQLKKQQVAEEE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcaagtgattctccagttcattcatcaagtagtagtgacgatcttgctgca
ttccttgatgctgaactggactctgcctcagatgcttcttctggacccagcgaagaagaa
gaagaagccgaggatgatgaagaatctgggttaaagagacgaaagttagagcatttagaa
actgtagacgaagaggagattgaggaagcatcctcaagtaaaggtgaatgccagcaccca
ggatcatttgggaatatgtgtttcgtctgtggacaaaagttggaagaaaccggtgtttca
tttagatacatacacaaggaaatgaggctcaatgaagatgaaatctcccggttgcgtgat
tcagattcgagattcttgcaacgccagcggaagttgtatttagttctcgatctagaccac
acactgcttaattcaaccgtactaagggacctgaaaccagaggaggaatacttgaaaagc
catacacattctcttcaagatgtttccggaggcagtcttttcatgctggaatttatgcac
atgatgaccaaactgaggccatttgttcactcatttctaaaagaagccagtgagatgttt
gtgatgtacatatacacaatgggagatagggcatatgcgcgacagatggcgaagctactg
gaccccagaggagagtactttggtgatcggatcatttctcgggatgacggcacagtgaga
catcaaaagagtctagatgtggtgcttggacaagaaagtgctgttctgattcttgacgat
acagagaatgcgtggccaaatcacaaggacaatttgattgtgatagagaggtatcacttt
ttcgcttcgagctgcagacagtttgatcacaaatacaagtctctatcggagttgaagagc
gatgagagtgaaccagatggggcacttgcaacagttctgaaagtcctaaaacaagcgcat
gctctattctttgagaatgtggatgaagacatatcaaacagagatgttaggtcaatgctg
aaacaagtgcgtaaagaggtactcaaaggatgtaaagtagtgttcagtcgggtgttccca
accaaggctaagccagaagatcaccctctgtggaagatggctgaagaactaggagccacc
tgtgcaacggaagtggatgcatcagtgacacacgtggtggctatggatgtgggaacagag
aaggcacgttgggcagtaagagagaagaagtatgtggttcatagaggatggatagatgca
gctaattacctgtggaagaagcagccagaagagaagttcagtttagagcagctcaagaag
caacaagtagcggaagaagagtga
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integrated database retrieval system
