Arabidopsis lyrata (lyrate rockcress): 9302321
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Entry
9302321 CDS
T01578
Name
(RefSeq) VAMP-like protein YKT61 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9302321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9302321
Membrane trafficking [BR:
aly04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
9302321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
9302321
NCBI-ProteinID:
XP_020886335
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MKITALLVLKCAPETSDPVILANASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQS
VQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGEAWRSAKEDSSQP
WPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSM
ASQMFYKQAKKTNSCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgccttactggttctcaagtgcgctcccgaaacttctgatcccgttatc
ctcgccaacgcttccgacgtctctcacttcggttatttccagcgatctagcgtcaaggag
ttcgtcgtctttgtcggtcgcactgtcgccagccgaacccctccttcccagcgccagtct
gtccaacacgaagagtacaaggttcacgcttacaatagaaatggcctttgcgcggtgggg
ttcatggatgatcattatcctgttcgaagtgctttttctcttcttaatcaggtcctagat
gagtaccagaagagttttggtgaggcatggaggtctgcaaaagaagactccagtcagcct
tggccatacttaactgaagctttaaacaaatttcaggacccagcagaggctgataagctg
ttgaaaatccagagggagttggatgagaccaagattatccttcataaaaccattgatagt
gttctagcccgtggtgagaagctggacagcctagtggagaagagctcagatttaagcatg
gcatcacagatgttttacaagcaagcgaagaaaacaaattcatgctgtactattctgtga
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