Arabidopsis lyrata (lyrate rockcress): 9302328
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Entry
9302328 CDS
T01578
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03082
ATP-dependent chromatin remodeling
aly03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
9302328
03083 Polycomb repressive complex
9302328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9302328
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
9302328
Histone modification proteins
HAT complexes
HATB complex
9302328
HDAC complexes
Sin3A-HDAC complex
9302328
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
9302328
PRC2.2
9302328
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
9302328
Heterochromatin formation proteins
Other heterochromatin formation proteins
9302328
Chromatin remodeling factors
NuRD complex
9302328
NuRF complex
9302328
NuRF complex (fruit fly)
9302328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
WD_LRWD1
eIF2A
MIOS_WD40
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
9302328
NCBI-ProteinID:
XP_020878285
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLIITHALEWPSLTVEWLPDREEPSGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTLEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGPGE
EPSKAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaagaggaaatgcgaggtgagattgaggagcgactaatcaatgaagag
tacaagatctggaagaagaacactcctttcctctacgatctcattattactcacgctctc
gagtggccttcacttactgttgaatggcttcctgaccgtgaagaaccttccggcaaagac
tactccgttcagaagatgattctcggtacccatacctccgagaacgagcctaattacttg
atgctagcacaagttcagcttcctcttgacgatacagagagtgaagctcgtcagtacgat
gatgaccgctctgaatttggtggctttggctgtgcaactggaaaggtgcaaattatccag
cagataaatcatgatggcgaggttaatcgagctcggtacatgcctcaaaatccattcata
attgctaccaagacagtaaatgcggaggtctatgttttcgattacagtaagcatccatct
aagccccctcttgatggggcttgtaatcctgatttaaagcttagaggtcacagttctgag
ggatatggtctctcttggagtaagttcaagcagggtcatttgctcagcggctctgatgat
gctcagatctgcttgtgggatattaacgctactcctaaaaacaaatcccttgacgctcag
cagatctttaaggctcatgaaggcgttgtggaagatgttgcatggcatctgagacatgaa
tacctgtttggatccgttggagatgaccaataccttcttatatgggatcttcgttctcct
tctgccagtaaaccagtacagtctgtggttgctcattcgatggaggttaactgcttagcc
ttcaatccatttaatgagtgggttgtggcaacaggatcaactgacaagactgttaaatta
ttcgatctacggaagctaagcactgctcttcacacatttgatagccacaaagaggaggtt
ttccaagttggttggaacccaaagaacgagactatcttagcctcatgttgccttggtaga
agacttatggtttgggaccttagcaggatcgatgaggagcagacactggaggatgcagag
gacggcccacctgagctgctgtttattcacggtggtcacactagcaaaatttcagatttc
tcttggaatccttgcgaagattgggtaatttccagtgttgctgaggacaacatactccaa
atatggcaaatggctgagaacatctatcatgatgaggatgacgctccaggtccaggggaa
gaaccatcaaaagcttcttag
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integrated database retrieval system